RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 RP2O75695 350 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 CFDP00746 253 aaPredicted RBP16.27■□□□□ 0.19
CCM2-216ENST00000488727 TNFRSF1AP19438 455 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 GATA4P43694 442 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 MTCP1P56278 107 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 OR5H2Q8NGV7 314 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 OR10K1Q8NGX5 313 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 RDH5Q92781 318 aa16.27■□□□□ 0.19
CCM2-216ENST00000488727 FXYD6-FXYD2A0A087WZ82 144 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 ARPC5O15511 151 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 AMY2BP19961 511 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 OR3A3P47888 321 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 GPM6AP51674 278 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 MRPS11P82912 194 aaKnown RBP16.26■□□□□ 0.19
CCM2-216ENST00000488727 LIN54Q6MZP7 749 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 TMUB2Q71RG4 321 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 PEG10Q86TG7 708 aaKnown RBP16.26■□□□□ 0.19
CCM2-216ENST00000488727 MOGAT3Q86VF5 341 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 LHFPL1Q86WI0 220 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 TMEM185AQ8NFB2 350 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 SCGB3A2Q96PL1 93 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 PHB2Q99623 299 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 MICU1Q9BPX6 476 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 RTL8AQ9BWD3 113 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 FXYD6Q9H0Q3 95 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 UFSP2Q9NUQ7 469 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 DCAF16Q9NXF7 216 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 OTOGQ6ZRI0 2925 aa16.26■□□□□ 0.19
CCM2-216ENST00000488727 LEUTXA8MZ59 168 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 DUS4LO95620 317 aaKnown RBP16.25■□□□□ 0.19
CCM2-216ENST00000488727 GRPP07492 148 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 FPR2P25090 351 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 PMELP40967 661 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 IL13RA1P78552 427 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 ZNF154Q13106 437 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 ESCO2Q56NI9 601 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 TMEM65Q6PI78 240 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 OR5A2Q8NGI9 324 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 MARCH1Q8TCQ1 289 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 HIST1H2AAQ96QV6 131 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 IL36GQ9NZH8 169 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 HSF4Q9ULV5 492 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 GPR132Q9UNW8 380 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 PPP1R3CQ9UQK1 317 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 IGKV1-27A0A075B6S5 117 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 B3GALNT1O75752 331 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 TMEM225BP0DP42 221 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 SLC25A4P12235 298 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 RBP2P50120 134 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 CLEC12BQ2HXU8 276 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 FAM76BQ5HYJ3 339 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 PRSS57Q6UWY2 283 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 TMEM17Q86X19 198 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 C11orf53Q8IXP5 236 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 ADAD2Q8NCV1 583 aaKnown RBP16.25■□□□□ 0.19
CCM2-216ENST00000488727 CCL17Q92583 94 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 BORCS8Q96FH0 119 aa16.25■□□□□ 0.19
CCM2-216ENST00000488727 ELL3Q9HB65 397 aaPredicted RBP16.25■□□□□ 0.19
CCM2-216ENST00000488727 DBX1A6NMT0 343 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 ZNF732B4DXR9 585 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 SNU13P55769 128 aaKnown RBP16.24■□□□□ 0.19
CCM2-216ENST00000488727 GNG3P63215 75 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 MZT1Q08AG7 82 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 ZNF826PQ6ZT77 177 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 WFDC11Q8NEX6 87 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 PXT1Q8NFP0 134 aa16.24■□□□□ 0.19
CCM2-216ENST00000488727 A0A0B4J2A0 478 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 PQLC2LA1A4F0 135 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 OR5B21A6NL26 309 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 PDLIM4P50479 330 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 FUT6P51993 359 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 RSU1Q15404 277 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 SURF2Q15527 256 aaPredicted RBP16.23■□□□□ 0.19
CCM2-216ENST00000488727 HFEQ30201 348 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 TMEM128Q5BJH2 165 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 NHLRC3Q5JS37 347 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 SHEQ5VZ18 495 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 CLEC2AQ6UVW9 174 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 C10orf105Q8TEF2 133 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 FAM168AQ92567 244 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 TLNRD1Q9H1K6 362 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 CHODLQ9H9P2 273 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 TMEM106BQ9NUM4 274 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 SHPKQ9UHJ6 478 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 KIF25Q9UIL4 384 aa16.23■□□□□ 0.19
CCM2-216ENST00000488727 IGHV4-30-2A0A087WSY4 118 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 FAM230AA0A1W2PPH8 454 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 OR5H14A6NHG9 310 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 TMEM210A6NLX4 147 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 ATP1B3P54709 279 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 RAB14P61106 215 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 HOXA4Q00056 320 aaPredicted RBP16.22■□□□□ 0.19
CCM2-216ENST00000488727 SCCPDHQ8NBX0 429 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 OR5AP2Q8NGF4 316 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 Q8TCH9 128 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 EMG1Q92979 244 aaKnown RBP16.22■□□□□ 0.19
CCM2-216ENST00000488727 ERGIC1Q969X5 290 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 MRPS24Q96EL2 167 aaKnown RBP16.22■□□□□ 0.19
CCM2-216ENST00000488727 CYYR1Q96J86 154 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms