RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TOMM40LQ969M1 308 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 S100A13Q99584 98 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 DPCDQ9BVM2 203 aaPredicted RBP18.02■□□□□ 0.48
PTPN4-211ENST00000488279 METTL9Q9H1A3 318 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 ST3GAL6Q9Y274 331 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 ZNF281Q9Y2X9 895 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 NOTCH3Q9UM47 2321 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 NPIPB11E5RHQ5 1161 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 OGG1O15527 345 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 IGHV3-7P01780 117 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 CSTBP04080 98 aaKnown RBP18.01■□□□□ 0.47
PTPN4-211ENST00000488279 PF4V1P10720 104 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 SLC16A12Q6ZSM3 486 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 OSR2Q8N2R0 312 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 SUMF2Q8NBJ7 301 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 OR10A7Q8NGE5 316 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 RFESDQ8TAC1 157 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 PLPPR1Q8TBJ4 325 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 SGCDQ92629 289 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 LEAP2Q969E1 77 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 IFT22Q9H7X7 185 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 PAK1IP1Q9NWT1 392 aaPredicted RBP18.01■□□□□ 0.47
PTPN4-211ENST00000488279 PSG11Q9UQ72 335 aa18.01■□□□□ 0.47
PTPN4-211ENST00000488279 TSSC4Q9Y5U2 329 aaPredicted RBP18.01■□□□□ 0.47
PTPN4-211ENST00000488279 SIRT4Q9Y6E7 314 aaPredicted RBP18.01■□□□□ 0.47
PTPN4-211ENST00000488279 OR7C1O76099 320 aaPredicted RBP18■□□□□ 0.47
PTPN4-211ENST00000488279 CD33P20138 364 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 BDKRB2P30411 391 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 MADCAM1Q13477 382 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 LTC4SQ16873 150 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 TCTEX1D4Q5JR98 221 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 C9orf152Q5JTZ5 239 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 DDI2Q5TDH0 399 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 WFDC9Q8NEX5 89 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 OR4X2Q8NGF9 303 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 OR52N1Q8NH53 320 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 SMIM19Q96E16 107 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 CHCHD3Q9NX63 227 aaKnown RBP18■□□□□ 0.47
PTPN4-211ENST00000488279 IL36GQ9NZH8 169 aa18■□□□□ 0.47
PTPN4-211ENST00000488279 DIMT1Q9UNQ2 313 aaKnown RBP18■□□□□ 0.47
PTPN4-211ENST00000488279 EXOSC1Q9Y3B2 195 aaKnown RBP18■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A18PA6NE21 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A16PA6NEW6 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A20PA6NIJ5 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 SH2D7A6NKC9 451 aaPredicted RBP17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A9PA6NNJ1 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A12PA8MX19 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A5PA8MXJ8 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 CLIC3O95833 236 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A15PP0C7V4 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A13PP0C7W8 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A14PP0C7W9 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 FAM90A24PP0C7X0 464 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 GZMHP20718 246 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 NHLRC3Q5JS37 347 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 OR56B4Q8NH76 319 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 GHSRQ92847 366 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 NECAP2Q9NVZ3 263 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 MOB4Q9Y3A3 225 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 HSPE1-MOB4S4R3N1 261 aa17.99■□□□□ 0.47
PTPN4-211ENST00000488279 TRAV39A0A0B4J263 110 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 ZNF780AO75290 641 aaPredicted RBP17.98■□□□□ 0.47
PTPN4-211ENST00000488279 SSTR5P35346 364 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 RAB7AP51149 207 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 RBM11P57052 281 aaKnown RBP17.98■□□□□ 0.47
PTPN4-211ENST00000488279 MED21Q13503 144 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 RIPK1Q13546 671 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 TTC23Q5W5X9 447 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 Q6ZPA2 131 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 LINC00596Q86U02 117 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 DRAM1Q8N682 238 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 OR10X1Q8NGY0 326 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 CYGBQ8WWM9 190 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 MYDGFQ969H8 173 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 TMEM80Q96HE8 168 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 CKLFQ9UBR5 152 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 CLEC2DQ9UHP7 191 aa17.98■□□□□ 0.47
PTPN4-211ENST00000488279 TMEM30CPA0ZSE6 113 aa17.97■□□□□ 0.47
PTPN4-211ENST00000488279 GEMIN2O14893 280 aaKnown RBP17.97■□□□□ 0.47
PTPN4-211ENST00000488279 SNRNP70P08621 437 aaKnown RBP17.97■□□□□ 0.47
PTPN4-211ENST00000488279 SERPINA2P20848 420 aa17.97■□□□□ 0.47
PTPN4-211ENST00000488279 GNG10P50151 68 aa17.97■□□□□ 0.47
PTPN4-211ENST00000488279 HES1Q14469 280 aa17.97■□□□□ 0.47
PTPN4-211ENST00000488279 OR8H3Q8N146 312 aa17.97■□□□□ 0.47
PTPN4-211ENST00000488279 ZNF581Q9P0T4 197 aa17.97■□□□□ 0.47
PTPN4-211ENST00000488279 GTF2F2P13984 249 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 LRRC36Q1X8D7 754 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 MPV17LQ2QL34 196 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 SLC22A6Q4U2R8 563 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 YIF1BQ5BJH7 314 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 ATAD3CQ5T2N8 411 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 DMKNQ6E0U4 476 aaPredicted RBP17.96■□□□□ 0.47
PTPN4-211ENST00000488279 SETD9Q8NE22 299 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 OR13C5Q8NGS8 318 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 PHF21AQ96BD5 680 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 ORAI1Q96D31 301 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 ZNF184Q99676 751 aaPredicted RBP17.96■□□□□ 0.47
PTPN4-211ENST00000488279 C8orf4Q9NR00 106 aa17.96■□□□□ 0.47
PTPN4-211ENST00000488279 TRBV5-5A0A0J9YX44 114 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 A0A1W2PPI3 338 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms