RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 GMFBP60983 142 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 PPP1R1AQ13522 171 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 KIR2DS1Q14954 304 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 EFNB3Q15768 340 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 SPRNQ5BIV9 151 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 NOXA1Q86UR1 476 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ADAD2Q8NCV1 583 aaKnown RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 OR2AK2Q8NG84 335 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 PSMG3-AS1Q96PY0 264 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ZNF2Q9BSG1 426 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 ZNF436Q9C0F3 470 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 LIME1Q9H400 295 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 TMEM165Q9HC07 324 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 RASL12Q9NYN1 266 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ZDHHC8Q9ULC8 765 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 AKAP6Q13023 2319 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 CELSR2Q9HCU4 2923 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 B9A039 149 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 H7C1Q1 480 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 IGHV1-46P01743 117 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 HLA-AP01891 365 aaKnown RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 GSTT2P0CG29 244 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 GZMKP49863 264 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 DHODHQ02127 395 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 MST1LQ2TV78 715 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ZNF497Q6ZNH5 498 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 MOB1BQ7L9L4 216 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 FAM90A1Q86YD7 464 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 C12orf45Q8N5I9 185 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ITLN1Q8WWA0 313 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 TMEM230Q96A57 120 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 RTBDNQ9BSG5 229 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 SEBOXQ9HB31 216 aaPredicted RBP11.92□□□□□ -0.5
CUX1-209ENST00000487284 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 GLS2Q9UI32 602 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 KIAA2026Q5HYC2 2103 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 C9orf170A2RU37 121 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 TRDCB7Z8K6 153 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 IFNL4K9M1U5 179 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 M0R233 179 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 FABP7O15540 132 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 OR2A4O95047 310 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 GIPP09681 153 aaPredicted RBP11.91□□□□□ -0.5
CUX1-209ENST00000487284 GLP1RP43220 463 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 TMEM128Q5BJH2 165 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 C20orf204Q6ZNR8 217 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 ZCCHC24Q8N2G6 241 aaKnown RBP11.91□□□□□ -0.5
CUX1-209ENST00000487284 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 DIRC2Q96SL1 478 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 CLEC4MQ9H2X3 399 aaPredicted RBP11.91□□□□□ -0.5
CUX1-209ENST00000487284 DLL4Q9NR61 685 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
CUX1-209ENST00000487284 DUS4LO95620 317 aaKnown RBP11.9□□□□□ -0.5
CUX1-209ENST00000487284 CD55P08174 381 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 SOD3P08294 240 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 DANCRP0C864 163 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 AKR1C4P17516 323 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 EGR1P18146 543 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 TNFSF4P23510 183 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.5
CUX1-209ENST00000487284 HLA-DRB3P79483 266 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 TNFAIP6P98066 277 aaPredicted RBP11.9□□□□□ -0.5
CUX1-209ENST00000487284 HOXA4Q00056 320 aaPredicted RBP11.9□□□□□ -0.5
CUX1-209ENST00000487284 TLE4Q04727 773 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 BAMBIQ13145 260 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 NLRC3Q7RTR2 1065 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 MITD1Q8WV92 249 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 MOB3AQ96BX8 217 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 PIPOXQ9P0Z9 390 aa11.9□□□□□ -0.5
CUX1-209ENST00000487284 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 SMLR1H3BR10 107 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 LHBP01229 141 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 CD8AP01732 235 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 CTSDP07339 412 aaPredicted RBP11.89□□□□□ -0.51
CUX1-209ENST00000487284 SCTP09683 121 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 PGAM2P15259 253 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 PI3P19957 117 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 ERP29P30040 261 aaKnown RBP11.89□□□□□ -0.51
CUX1-209ENST00000487284 FCGR2CP31995 323 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 KCNJ3P48549 501 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 UCP3P55916 312 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 SNRPD2P62316 118 aaKnown RBP11.89□□□□□ -0.51
CUX1-209ENST00000487284 IL13RA1P78552 427 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 HERPUD1Q15011 391 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 KCNJ8Q15842 424 aa11.89□□□□□ -0.51
CUX1-209ENST00000487284 C2orf68Q2NKX9 166 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms