RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 HTR1DP28221 377 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 GP2P55259 537 aaKnown RBP12.88□□□□□ -0.35
HDAC8-218ENST00000486704 TPBGQ13641 420 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 INSL4Q14641 139 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 FAM189A2Q15884 450 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 SSX2Q16385 188 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 LY6EQ16553 131 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 RBM48Q5RL73 367 aaKnown RBP12.88□□□□□ -0.35
HDAC8-218ENST00000486704 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 GLIPR1L1Q6UWM5 242 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 ABHD12Q8N2K0 398 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 UFD1Q92890 307 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 KIRREL1Q96J84 757 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 CITED1Q99966 193 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 TMED9Q9BVK6 235 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 ZNF286AQ9HBT8 521 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 SPACA1Q9HBV2 294 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 ABCB10Q9NRK6 738 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 ING3Q9NXR8 418 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 CALYQ9NYX4 217 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 PITPNC1Q9UKF7 332 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 CHST1O43916 411 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 UCHL1P09936 223 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 VHLP40337 213 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 MLLT11Q13015 90 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-218ENST00000486704 TRAM1Q15629 374 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 TBCEQ15813 527 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-218ENST00000486704 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 OR10A7Q8NGE5 316 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 NDNFQ8TB73 568 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 CREB3L1Q96BA8 519 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 CNBD2Q96M20 576 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 FBLN5Q9UBX5 448 aa12.87□□□□□ -0.35
HDAC8-218ENST00000486704 TMEM30CPA0ZSE6 113 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 A6NDX4 124 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
HDAC8-218ENST00000486704 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 FAM27D1Q5T7N8 215 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 C11orf88Q6PI97 169 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 BRICD5Q6PL45 260 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 LRRTM1Q86UE6 522 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 DTX3Q8N9I9 347 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 Q96M66 194 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 NPFFR1Q9GZQ6 430 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 DPM3Q9P2X0 92 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
HDAC8-218ENST00000486704 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 F2RL2O00254 374 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 UBBP0CG47 229 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 CD37P11049 281 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 MGMTP16455 207 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 CPEP16870 476 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 GABRA5P31644 462 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 CEACAM3P40198 252 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 KIR2DS4P43632 304 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 HSD17B12Q53GQ0 312 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 C1orf100Q5SVJ3 147 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 CEACAM19Q7Z692 300 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 TMEM104Q8NE00 496 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 OR9G1Q8NH87 305 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 MRGPRDQ8TDS7 321 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 CCDC90BQ9GZT6 254 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 CST11Q9H112 138 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 IDI2-AS1Q9NZ38 188 aa12.85□□□□□ -0.35
HDAC8-218ENST00000486704 MGAM2Q2M2H8 2515 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 LEUTXA8MZ59 168 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 OOSP1A8MZH6 123 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 BUB1B-PAK6H3BSN5 160 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 H3BUI4 141 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 TOR1AO14656 332 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 GLAP06280 429 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 HSMCR30P0CW71 290 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 SRMP19623 302 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 GZMHP20718 246 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 SSTR5P35346 364 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms