RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 ANKRD34BA5PLL1 514 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 ADAP1O75689 374 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 S100GP29377 79 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 HMGN3Q15651 99 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 WDR82Q6UXN9 313 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 Q6ZR03 302 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 DOLPP1Q86YN1 238 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 RDH5Q92781 318 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 ABHD14BQ96IU4 210 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 TOLLIPQ9H0E2 274 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 TMEM222Q9H0R3 208 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 JKAMPQ9P055 326 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 TAAR3PQ9P1P4 343 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 OR2W1Q9Y3N9 320 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 SPTBN2O15020 2390 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 LOC400499M0QZD8 3231 aa10.12□□□□□ -0.79
PKP4-213ENST00000486254 MAP1BP46821 2468 aaKnown RBP10.11□□□□□ -0.79
PKP4-213ENST00000486254 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 A0A1B0GW55 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.11□□□□□ -0.79
PKP4-213ENST00000486254 MPPED1O15442 326 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 CDS2O95674 445 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 HAND1O96004 215 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 SCTP09683 121 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 OR5AC1P0C628 307 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4L2P0CJ85 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4L3P0CJ86 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4L4P0CJ87 422 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4L5P0CJ88 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4L6P0CJ89 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4L7P0CJ90 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 RRASP10301 218 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUSP1P28562 367 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 GNRHRP30968 328 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 GATA4P43694 442 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 FXYD4P59646 89 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 MSMO1Q15800 293 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 LRRC37A5PQ49AS3 106 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 SLC35E4Q6ICL7 350 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 ACP7Q6ZNF0 438 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 CMTM1Q8IZ96 169 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 RPRMLQ8N4K4 120 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 ZNF565Q8N9K5 539 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 NUP37Q8NFH4 326 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 OR5T2Q8NGG2 359 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 GLYATL2Q8WU03 294 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 OR10C1Q96KK4 312 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 ARPC5LQ9BPX5 153 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 C1QTNF6Q9BXI9 259 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 SLC25A32Q9H2D1 315 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 DUX4Q9UBX2 424 aa10.11□□□□□ -0.79
PKP4-213ENST00000486254 TMEM30CPA0ZSE6 113 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 H0Y980 276 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 H0YIZ8 118 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 HS3ST1O14792 307 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 TAAR5O14804 337 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 UCP1P25874 307 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
PKP4-213ENST00000486254 KLF3P57682 345 aaPredicted RBP10.1□□□□□ -0.79
PKP4-213ENST00000486254 RBPJQ06330 500 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 IAH1Q2TAA2 248 aaPredicted RBP10.1□□□□□ -0.79
PKP4-213ENST00000486254 GGNBP1Q5YKI7 109 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 BVESQ8NE79 360 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 OR10J5Q8NHC4 309 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 CNTNAP3Q9BZ76 1288 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 SHARPINQ9H0F6 387 aa10.1□□□□□ -0.79
PKP4-213ENST00000486254 CHD3Q12873 2000 aaKnown RBP10.1□□□□□ -0.79
PKP4-213ENST00000486254 PRRC2CQ9Y520 2896 aaKnown RBP10.1□□□□□ -0.79
PKP4-213ENST00000486254 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 CLEC18AA5D8T8 446 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 LEUTXA8MZ59 168 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 SRRM5B3KS81 715 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 H0YL77 283 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 DEDDO75618 318 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 NMBP08949 121 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 SPINK2P20155 84 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 CCKARP32238 428 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 FABP6P51161 128 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 SMCO1Q147U7 214 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 TRAT1Q6PIZ9 186 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 BATF2Q8N1L9 274 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 CLEC18CQ8NCF0 446 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 LRRC20Q8TCA0 184 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 TMEM171Q8WVE6 324 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 DCUN1D4Q92564 292 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 AKR1E2Q96JD6 320 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 SPIN2AQ99865 258 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 SPIN2BQ9BPZ2 258 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 SLC5A7Q9GZV3 580 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms