RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 Q6ZS49 121 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CADM3Q8N126 398 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CLEC18CQ8NCF0 446 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 GAFA1Q96PS6 74 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 BEX2Q9BXY8 128 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 BEX1Q9HBH7 125 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 KIF25Q9UIL4 384 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 SCP2D1Q9UJQ7 156 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 PPIAL4AQ9Y536 164 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 GLIPR1P48060 266 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 TSPAN5P62079 268 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 SRSF7Q16629 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL9A1-207ENST00000486080 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 SP5Q6BEB4 398 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-207ENST00000486080 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 SNX22Q96L94 193 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 PRRT1Q99946 306 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-207ENST00000486080 LIME1Q9H400 295 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 SLC2A8Q9NY64 477 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-207ENST00000486080 TRAPPC2LQ9UL33 140 aa12.03□□□□□ -0.48
COL9A1-207ENST00000486080 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-207ENST00000486080 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 NBPF19A0A087WUL8 3843 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 TRAV38-1A0A0B4J264 116 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 TMEM30CPA0ZSE6 113 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 MEX3AA1L020 520 aaKnown RBP12.02□□□□□ -0.48
COL9A1-207ENST00000486080 FUOMA2VDF0 154 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 TRDCB7Z8K6 153 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 J3QKU1 62 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 K7N7A8 449 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 RP2O75695 350 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 GOSR1O95249 250 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 OR5H8P0DN80 308 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 BCAP31P51572 246 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 TLE4Q04727 773 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 EDDM3AQ14507 147 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 HERPUD1Q15011 391 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 ZMYND11Q15326 602 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 TATDN3Q17R31 274 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 KRBOX4Q5JUW0 171 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 SLC35E4Q6ICL7 350 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF788Q6ZQV5 615 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF561Q8N587 486 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 ARRDC1Q8N5I2 433 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 UBALD1Q8TB05 177 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 TMPRSS13Q9BYE2 586 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 PLEKHF2Q9H8W4 249 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 NECAP2Q9NVZ3 263 aa12.02□□□□□ -0.48
COL9A1-207ENST00000486080 MEIKINA0A087WXM9 373 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 IGKV1-6A0A0C4DH72 117 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 H7C1Q1 480 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 FABP7O15540 132 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 NDUFS7O75251 213 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 TK1P04183 234 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 ANXA7P20073 488 aaKnown RBP12.02□□□□□ -0.49
COL9A1-207ENST00000486080 KCNJ3P48549 501 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 NPY4RP50391 375 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 SEC61A1P61619 476 aaKnown RBP12.02□□□□□ -0.49
COL9A1-207ENST00000486080 BTG1P62324 171 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 FGFRL1Q8N441 504 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 TMEM185AQ8NFB2 350 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 TERB2Q8NHR7 220 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 ZNF665Q9H7R5 613 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 VSIG4Q9Y279 399 aa12.02□□□□□ -0.49
COL9A1-207ENST00000486080 TACC2O95359 2948 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 TNFRSF13BO14836 293 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 TMPRSS2O15393 492 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 RLN1P04808 185 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 COX6B1P14854 86 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 KIR2DS4P43632 304 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 KIR2DS1Q14954 304 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 ATPAF1Q5TC12 328 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 AADACL3Q5VUY0 350 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 ZNF660Q6AZW8 331 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 LYPD2Q6UXB3 125 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 SLC25A21Q9BQT8 299 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 ZNF2Q9BSG1 426 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 MBNL3Q9NUK0 354 aaKnown RBP12.01□□□□□ -0.49
COL9A1-207ENST00000486080 ALG5Q9Y673 324 aa12.01□□□□□ -0.49
COL9A1-207ENST00000486080 OR5H14A6NHG9 310 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 MGST3O14880 152 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 BET1O15155 118 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 SIGLEC5O15389 551 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 PEX14O75381 377 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 DAOP14920 347 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 IL13RA1P78552 427 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 LHFPL1Q86WI0 220 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 TMEM17Q86X19 198 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 PRR18Q8N4B5 295 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 OR6F1Q8NGZ6 308 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 PPP1R35Q8TAP8 253 aa12□□□□□ -0.49
COL9A1-207ENST00000486080 MARCH1Q8TCQ1 289 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms