RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 SEBOXQ9HB31 216 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-220ENST00000482645 MEX3AA1L020 520 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 HLA-DQB1P01920 261 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 KRTAP1-1Q07627 177 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 OR5D13Q8NGL4 314 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 NUDCD2Q8WVJ2 157 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 SOSTQ9BQB4 213 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 FAAP24Q9BTP7 215 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 SRRQ9GZT4 340 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 HSF4Q9ULV5 492 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 KCNK7Q9Y2U2 307 aa16.48■□□□□ 0.23
TRAPPC12-220ENST00000482645 TRAV20A0A0B4J274 112 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 A0A1W2PQ09 198 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 MCRIP1C9JLW8 97 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 H3BUI4 141 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 J3QRK9 145 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 GPR37O15354 613 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 CD5LO43866 347 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 LY6G6DO95868 133 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 GSTP1P09211 210 aaKnown RBP16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 PTBP1P26599 531 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 GNG2P59768 71 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 GUCA2AQ02747 115 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 AESQ08117 197 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 DCAF12L2Q5VW00 463 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 CLEC9AQ6UXN8 241 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 Q71RC1 249 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 FAM185AQ8N0U4 392 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 DCTN5Q9BTE1 182 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 GSX1Q9H4S2 264 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 RABL2AQ9UBK7 228 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 AK3Q9UIJ7 227 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 RPUSD1Q9UJJ7 312 aaKnown RBP16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 RABL2BQ9UNT1 228 aa16.47■□□□□ 0.23
TRAPPC12-220ENST00000482645 IGHV2-70DA0A0C4DH43 119 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 MGST3O14880 152 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 ECDO95905 644 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 RPL31P62899 125 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 ARFRP1Q13795 201 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 ARL6IP1Q15041 203 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 FAHD2BQ6P2I3 314 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 BTNL3Q6UXE8 466 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 C15orf40Q8WUR7 153 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 FAHD2AQ96GK7 314 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 YAE1D1Q9NRH1 226 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 C19orf12Q9NSK7 152 aa16.46■□□□□ 0.23
TRAPPC12-220ENST00000482645 PPIAL4CA0A0B4J2A2 164 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 MEIOCA2RUB1 952 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 MEIS3P1A6NDR6 274 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 SERPINE3A8MV23 424 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 ENSAO43768 121 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 PPIAL4GP0DN37 164 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 DGCR2P98153 550 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 RBM39Q14498 530 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 KRBOX4Q5JUW0 171 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 HACD4Q5VWC8 232 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 HDHD3Q9BSH5 251 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 KCNS2Q9ULS6 477 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 CD3GP09693 182 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 PRSS3P35030 304 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 DVL1P1P54792 670 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 MRPS15P82914 257 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 PNLIPRP3Q17RR3 467 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 TRAPPC6BQ86SZ2 158 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 Q8N402 240 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 CMSS1Q9BQ75 279 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 CHMP1AQ9HD42 196 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 ETAA1Q9NY74 926 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 ONECUT1Q9UBC0 465 aa16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 POLR3KQ9Y2Y1 108 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-220ENST00000482645 CTDSPLO15194 276 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 TPPPO94811 219 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 GLIPR1P48060 266 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 PAX2Q02962 417 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 PLPPR1Q8TBJ4 325 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 SMIM4Q8WVI0 70 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 COQ2Q96H96 371 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 SDHCQ99643 169 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 INSIG2Q9Y5U4 225 aa16.44■□□□□ 0.22
TRAPPC12-220ENST00000482645 TRBV23-1A0A0A0MS06 115 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 CSN2P05814 226 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 LPLP06858 475 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 PPP5CP53041 499 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 P2RX3P56373 397 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 MRPS10P82664 201 aaKnown RBP16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 OR52I2Q8NH67 350 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 FCAMRQ8WWV6 532 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 C12orf4Q9NQ89 552 aa16.43■□□□□ 0.22
TRAPPC12-220ENST00000482645 KIR2DS1A0A191URI9 304 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 FUOMA2VDF0 154 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 GABARAPH6UMI1 98 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 SSX5O60225 188 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 GLAP06280 429 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 FCER2P06734 321 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 LIPFP07098 398 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 MELTFP08582 738 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 CD40LGP29965 261 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 ARF6P62330 175 aa16.42■□□□□ 0.22
TRAPPC12-220ENST00000482645 ZNF273Q14593 569 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms