RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 HMGN3Q15651 99 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
ATG4B-220ENST00000482507 PAPOLGQ9BWT3 736 aaKnown RBP12.74□□□□□ -0.37
ATG4B-220ENST00000482507 FREM1Q5H8C1 2179 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 APC2O95996 2303 aa12.74□□□□□ -0.37
ATG4B-220ENST00000482507 IGKV1-6A0A0C4DH72 117 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 M0R036 132 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 HSPB6O14558 160 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 GPR37O15354 613 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 IGHEP01854 428 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 CCNOP22674 350 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 OMGP23515 440 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 PMELP40967 661 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 GPM6AP51674 278 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
ATG4B-220ENST00000482507 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 DPPA2Q7Z7J5 298 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM56Q96MV1 263 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 Q9N2K0 584 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM56-RWDD3S4R434 201 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 NAPSAO96009 420 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 CELA3AP09093 270 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 OR13C7P0DN81 318 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 CBR1P16152 277 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 HAAOP46952 286 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 PRDX4Q13162 271 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 GNMTQ14749 295 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 SPINK14Q6IE38 97 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 GAPTQ8N292 157 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 PSMF1Q92530 271 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 THOC3Q96J01 351 aaKnown RBP12.73□□□□□ -0.37
ATG4B-220ENST00000482507 REPIN1Q9BWE0 567 aaKnown RBP12.73□□□□□ -0.37
ATG4B-220ENST00000482507 MTCH1Q9NZJ7 389 aa12.73□□□□□ -0.37
ATG4B-220ENST00000482507 STRAPQ9Y3F4 350 aaKnown RBP12.73□□□□□ -0.37
ATG4B-220ENST00000482507 hCG_1809904A0A1W2PP81 198 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 A0A1W2PR64 198 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 A0A1W2PRV1 198 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 SLC33A1O00400 549 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-220ENST00000482507 ADAM20O43506 726 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 SSSCA1O60232 199 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 CDS2O95674 445 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 HLA-HP01893 362 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 IFNA4P05014 189 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 ARG1P05089 322 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 EPHA1P21709 976 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 ATP6V0CP27449 155 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-220ENST00000482507 RAB5BP61020 215 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 RTP5Q14D33 572 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 RBMS3Q6XE24 437 aaKnown RBP12.72□□□□□ -0.37
ATG4B-220ENST00000482507 PLPPR1Q8TBJ4 325 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 UBE2J1Q9Y385 318 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-220ENST00000482507 NCOR2Q9Y618 2525 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 C5orf52A6NGY3 159 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 SLC22A20A6NK97 555 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 NXPH3O95157 252 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 AGAP20933 346 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 CD82P27701 267 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 RAB5CP51148 216 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 SRYQ05066 204 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 DCAF10Q5QP82 559 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 Q6ZS49 121 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-220ENST00000482507 TECTBQ96PL2 329 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 SLC35B3Q9H1N7 401 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 MED13Q9UHV7 2174 aa12.72□□□□□ -0.37
ATG4B-220ENST00000482507 A0A1W2PPE2 198 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 MT-ND4LP03901 98 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 KRBOX4Q5JUW0 171 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 SPSB3Q6PJ21 355 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 ZNF695Q8IW36 515 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM252Q8N6L7 170 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 ZFP62Q8NB50 900 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-220ENST00000482507 TMEM45BQ96B21 275 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 CCL28Q9NRJ3 127 aa12.71□□□□□ -0.37
ATG4B-220ENST00000482507 NOSIPQ9Y314 301 aaKnown RBP12.71□□□□□ -0.37
ATG4B-220ENST00000482507 SPENQ96T58 3664 aaKnown RBP12.71□□□□□ -0.38
ATG4B-220ENST00000482507 C5orf49A4QMS7 147 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 ARGFXA6NJG6 315 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 HSD17B6O14756 317 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 NGFP01138 241 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 ITGA3P26006 1051 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 CYB561P49447 251 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 CLN3Q13286 438 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 RNF212Q495C1 297 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.38
ATG4B-220ENST00000482507 OR2G3Q8NGZ4 309 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 CD300LFQ8TDQ1 290 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 HES7Q9BYE0 225 aa12.71□□□□□ -0.38
ATG4B-220ENST00000482507 ACACAQ13085 2346 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 LINC01387J3KSC0 135 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 SYNGR1O43759 233 aa12.7□□□□□ -0.38
ATG4B-220ENST00000482507 MRPL33O75394 65 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms