RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ERVFRD-1P60508 538 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 RBM39Q14498 530 aaKnown RBP10.91□□□□□ -0.66
HDAC1-208ENST00000482310 RSBN1Q5VWQ0 802 aaPredicted RBP10.91□□□□□ -0.66
HDAC1-208ENST00000482310 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 TCF23Q7RTU1 214 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 LAX1Q8IWV1 398 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 FAM89BQ8N5H3 189 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 MCFD2Q8NI22 146 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 MRGPRDQ8TDS7 321 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 PTX4Q96A99 478 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 PCGF1Q9BSM1 259 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
HDAC1-208ENST00000482310 SEBOXQ9HB31 216 aaPredicted RBP10.91□□□□□ -0.66
HDAC1-208ENST00000482310 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
HDAC1-208ENST00000482310 TRGV10A0A0A0MS01 117 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 TRBV23-1A0A0A0MS06 115 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 A0A0G2JMP0 313 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 A0A0X1KG70 313 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 FUOMA2VDF0 154 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 FAM172BPA6NC97 362 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 TMEM235A6NFC5 223 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 A6NHS1 94 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 GPR37O15354 613 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 CSN2P05814 226 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 LIPFP07098 398 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 HIST1H1DP16402 221 aaKnown RBP10.9□□□□□ -0.66
HDAC1-208ENST00000482310 MRPS15P82914 257 aaKnown RBP10.9□□□□□ -0.66
HDAC1-208ENST00000482310 PAX2Q02962 417 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 ARFRP1Q13795 201 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 FAM189A2Q15884 450 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 LTC4SQ16873 150 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 RNASE12Q5GAN4 147 aaKnown RBP10.9□□□□□ -0.66
HDAC1-208ENST00000482310 C5orf24Q7Z6I8 188 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 PDZD9Q8IXQ8 264 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 PRR18Q8N4B5 295 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 OR4M2Q8NGB6 313 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 OR13A1Q8NGR1 328 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 MAFIPQ8WZ33 124 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 GCDHQ92947 438 aaPredicted RBP10.9□□□□□ -0.66
HDAC1-208ENST00000482310 S100A16Q96FQ6 103 aaKnown RBP10.9□□□□□ -0.66
HDAC1-208ENST00000482310 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 DIABLOQ9NR28 239 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 SIRT7Q9NRC8 400 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
HDAC1-208ENST00000482310 IGHV3OR16-10A0A075B7F0 116 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 TMEM127O75204 238 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 FCER2P06734 321 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 CD3GP09693 182 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 OMGP23515 440 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 KCNJ3P48549 501 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 CDNFQ49AH0 187 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 TMEM69Q5SWH9 247 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 PRAMEF5Q5TYX0 476 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 METTL11BQ5VVY1 283 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 SLC35E4Q6ICL7 350 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF782Q6ZMW2 699 aaPredicted RBP10.89□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 MRPL30Q8TCC3 161 aaKnown RBP10.89□□□□□ -0.67
HDAC1-208ENST00000482310 NUDCD2Q8WVJ2 157 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF714Q96N38 554 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 CMSS1Q9BQ75 279 aaKnown RBP10.89□□□□□ -0.67
HDAC1-208ENST00000482310 MIXL1Q9H2W2 232 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 MRPS7Q9Y2R9 242 aaKnown RBP10.89□□□□□ -0.67
HDAC1-208ENST00000482310 KCNK7Q9Y2U2 307 aa10.89□□□□□ -0.67
HDAC1-208ENST00000482310 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 MEIS3P1A6NDR6 274 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 H3BUI4 141 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 MFNGO00587 321 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 SCGNO76038 276 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 TOX4O94842 621 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 AVPP01185 164 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 APOA1P02647 267 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 MT-ND4P03905 459 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 RCC1P18754 421 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-208ENST00000482310 ERP29P30040 261 aaKnown RBP10.88□□□□□ -0.67
HDAC1-208ENST00000482310 SSTR5P35346 364 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 TAS2R20P59543 309 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 GNG2P59768 71 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 KLRD1Q13241 179 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 CR1LQ2VPA4 569 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 CNPY1Q3B7I2 92 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 CNIH2Q6PI25 160 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 VMO1Q7Z5L0 202 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 SNX29P2Q8IUI4 249 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 DACT3Q96B18 629 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-208ENST00000482310 TMPRSS13Q9BYE2 586 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 ABCG5Q9H222 651 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 BATF3Q9NR55 127 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 EXTL2Q9UBQ6 330 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF230Q9UIE0 474 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-208ENST00000482310 ADAM30Q9UKF2 790 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 POLR3KQ9Y2Y1 108 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-208ENST00000482310 AUP1Q9Y679 476 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 LINC00312Q9Y6C7 94 aa10.88□□□□□ -0.67
HDAC1-208ENST00000482310 SONP18583 2426 aaKnown RBP10.87□□□□□ -0.67
HDAC1-208ENST00000482310 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms