RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TOMM40LQ969M1 308 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 MUL1Q969V5 352 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 PGLYRP3Q96LB9 341 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 S100A13Q99584 98 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 DPCDQ9BVM2 203 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-212ENST00000482251 METTL9Q9H1A3 318 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 MMP28Q9H239 520 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 IDI2-AS1Q9NZ38 188 aa8.38□□□□□ -1.07
CPSF4-212ENST00000482251 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-212ENST00000482251 TRBV5-5A0A0J9YX44 114 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 FAM90A22PA8MWA6 464 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 MYL12BO14950 172 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-212ENST00000482251 OPN1MWP04001 364 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 MAS1P04201 325 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 IGFBP3P17936 291 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-212ENST00000482251 C21orf33P30042 268 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-212ENST00000482251 BRS3P32247 399 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 CEACAM3P40198 252 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 PRRX1P54821 245 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 RPS11P62280 158 aaKnown RBP eCLIP8.37□□□□□ -1.07
CPSF4-212ENST00000482251 MED21Q13503 144 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 DIAPH2-AS1Q14236 149 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 Q499Y3 187 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 LAIR2Q6ISS4 152 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 STX19Q8N4C7 294 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 JAGN1Q8N5M9 183 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 BPIFB6Q8NFQ5 453 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 OR56B4Q8NH76 319 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 OR9G1Q8NH87 305 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 CCDC107Q8WV48 283 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 RPEQ96AT9 228 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 R3HDM4Q96D70 268 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 CYYR1Q96J86 154 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 BARHL1Q9BZE3 327 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 CKLFQ9UBR5 152 aa8.37□□□□□ -1.07
CPSF4-212ENST00000482251 A0A087X0M5 115 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 IGHV3-43A0A0B4J1X8 118 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 A0A1B0GX30 115 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 EFCAB10A6NFE3 127 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 J3QR06 171 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 OR2F2O95006 317 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 ALDOBP05062 364 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 SNRNP70P08621 437 aaKnown RBP8.36□□□□□ -1.07
CPSF4-212ENST00000482251 CGB3P0DN86 165 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 CGB7P0DN87 165 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 IGHV3-43DP0DP04 118 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 FSTP19883 344 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 MNDAP41218 407 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 REG1BP48304 166 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 HES1Q14469 280 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 INSL4Q14641 139 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 YIF1BQ5BJH7 314 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 OGFRL1Q5TC84 451 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-212ENST00000482251 AWAT2Q6E213 333 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-212ENST00000482251 C10orf99Q6UWK7 81 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 ASCL4Q6XD76 172 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 DTX3Q8N9I9 347 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 ZNF565Q8N9K5 539 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 ZNF485Q8NCK3 441 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 OR5AU1Q8NGC0 362 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 WIPF2Q8TF74 440 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-212ENST00000482251 AKR1E2Q96JD6 320 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 WNT10AQ9GZT5 417 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 LIN7BQ9HAP6 207 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 C8orf4Q9NR00 106 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 IL36GQ9NZH8 169 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 PSG11Q9UQ72 335 aa8.36□□□□□ -1.07
CPSF4-212ENST00000482251 MRPS28Q9Y2Q9 187 aaKnown RBP8.36□□□□□ -1.07
CPSF4-212ENST00000482251 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-212ENST00000482251 TRBV5-7A0A0A0MS05 114 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 A0A1W2PPI3 338 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 TMEM30CPA0ZSE6 113 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 LY6LH3BQJ8 138 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 AMY1AP04745 511 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 AMY2AP04746 511 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 CELP19835 753 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 VHLP40337 213 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 KCNJ3P48549 501 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 WNT4P56705 351 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 TAS2R43P59537 309 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 HNF4GQ14541 408 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 CCDC144NLQ6NUI1 221 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 GLIPR1L1Q6UWM5 242 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 C16orf82Q7Z2V1 217 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 NDUFA11Q86Y39 141 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 PRR18Q8N4B5 295 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 DRAM1Q8N682 238 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 Q8NFD4 153 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 OR10X1Q8NGY0 326 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 FAM46BQ96A09 425 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 CREB3L1Q96BA8 519 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 RBMXL1Q96E39 390 aaKnown RBP8.35□□□□□ -1.07
CPSF4-212ENST00000482251 RBM14Q96PK6 669 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms