RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 KLK11Q9UBX7 282 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 UHRF1BP1LA0JNW5 1464 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 ARHGAP23Q9P227 1491 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 DNMT1P26358 1616 aaKnown RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 HECW1Q76N89 1606 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 MYBPHLA2RUH7 354 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 TRAPPC13A5PLN9 417 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 ARL5CA6NH57 179 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 INMT-MINDY4F8WBC2 141 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 H7C417 338 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 BANF1O75531 89 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 LYPLA1O75608 230 aaPredicted RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 REM1O75628 298 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 DHRS3O75911 302 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 TNFSF15O95150 251 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 ATP5G1P05496 136 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 CSN2P05814 226 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 OR5G3P0C626 314 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 SLC35G6P0C7Q6 338 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 IGHV4-38-2P0DP08 117 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 FOLR2P14207 255 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 CD1DP15813 335 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 SPI1P17947 270 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 TCN2P20062 427 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 PRTN3P24158 256 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 S100A11P31949 105 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 DEFA3P59666 94 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 LMO4P61968 165 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 RAP1AP62834 184 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 HBG1P69891 147 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 HBG2P69892 147 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 MEF2CQ06413 473 aaPredicted RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 ECSCRQ19T08 205 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 CCSMST1Q4G0I0 132 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 OCIAD2Q56VL3 154 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 RSBN1Q5VWQ0 802 aaPredicted RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 GOLT1AQ6ZVE7 132 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 ZNF550Q7Z398 422 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 SMIM29Q86T20 159 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 EXOC3-AS1Q8N2X6 119 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 C6orf223Q8N319 242 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 NPWQ8N729 165 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 GPR26Q8NDV2 337 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 FAM151AQ8WW52 585 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 RPUSD4Q96CM3 377 aaKnown RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 ZNF689Q96CS4 500 aaPredicted RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 PSMB7Q99436 277 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 GPER1Q99527 375 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 POMKQ9H5K3 350 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 YTHDC2Q9H6S0 1430 aaKnown RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 DMAC2Q9NW81 257 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 CALYQ9NYX4 217 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 MTFP1Q9UDX5 166 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 FBXO7Q9Y3I1 522 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 YTHDF2Q9Y5A9 579 aaKnown RBP3.23□□□□□ -1.89
VPS41-212ENST00000482217 ORC6Q9Y5N6 252 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 SELENOKQ9Y6D0 94 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 FAM135AQ9P2D6 1515 aa3.23□□□□□ -1.89
VPS41-212ENST00000482217 IGSF9BQ9UPX0 1349 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZNF609O15014 1411 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 PTPRKQ15262 1439 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 IGHV1OR21-1A0A087WYE8 117 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 hADV38S2A0JD32 116 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 GMNCA6NCL1 334 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 NKX2-6A6NCS4 301 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 F6UZH7 168 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 K7ERU9 68 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 TNFSF12O43508 249 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 TPST1O60507 370 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ARL6IP5O75915 188 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 C6orf47O95873 294 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 FAM107AO95990 144 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 C8GP07360 202 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 SPNP16150 400 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 CDK2P24941 298 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 DRD3P35462 400 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 PIGPP57054 158 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 MTPNP58546 118 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 HIST1H1AQ02539 215 aaPredicted RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 GSG1Q2KHT4 349 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 TTC32Q5I0X7 151 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZNF506Q5JVG8 444 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 SLC25A30Q5SVS4 291 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 FAM201AQ5SY85 155 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 TSPO2Q5TGU0 170 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZFAND6Q6FIF0 208 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 RNF165Q6ZSG1 346 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 FA2HQ7L5A8 372 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 CHMP1BQ7LBR1 199 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 C4orf33Q8N1A6 199 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 CBR4Q8N4T8 237 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 FNDC9Q8TBE3 224 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 DCAKDQ8WVC6 231 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 CANT1Q8WVQ1 401 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 CHCHD10Q8WYQ3 142 aaPredicted RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZNF486Q96H40 463 aaPredicted RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 NARS2Q96I59 477 aaKnown RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 PGLYRP4Q96LB8 373 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZNF354BQ96LW1 612 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 PPP3R2Q96LZ3 170 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms