RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MRPS28Q9Y2Q9 187 aaKnown RBP11.51□□□□□ -0.57
HDAC6-224ENST00000481929 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 DEGS1O15121 323 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 PDZK1IP1Q13113 114 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 Q6P435 159 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 HDXQ7Z353 690 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 OR10A7Q8NGE5 316 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 GIPC3Q8TF64 312 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-224ENST00000481929 C10orf35Q96D05 121 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 TEX12Q9BXU0 123 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 TUBA4BQ9H853 241 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 KIAA1456Q9P272 454 aa11.5□□□□□ -0.57
HDAC6-224ENST00000481929 IGHV4OR15-8A0A075B7B6 117 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 A0A087WW49 117 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 IGKV1-12A0A0C4DH73 117 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 C12orf77C9JDV5 145 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 G3V318 75 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 HSPB6O14558 160 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 KDM4BO94953 1096 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 RPP14O95059 124 aaKnown RBP11.49□□□□□ -0.57
HDAC6-224ENST00000481929 IGKV1D-12P01611 117 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-224ENST00000481929 PRKACBP22694 351 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 HTR1FP30939 366 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 CDK5Q00535 292 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 GALEQ14376 348 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 CYP2R1Q6VVX0 501 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 ANKRD13BQ86YJ7 626 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 SLC35F2Q8IXU6 374 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 TMEM104Q8NE00 496 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 OR51T1Q8NGJ9 327 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 MRGPRDQ8TDS7 321 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 RFT1Q96AA3 541 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 MNTQ99583 582 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 FAM110AQ9BQ89 295 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 TOLLIPQ9H0E2 274 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
HDAC6-224ENST00000481929 MRM2Q9UI43 246 aaKnown RBP11.49□□□□□ -0.57
HDAC6-224ENST00000481929 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 ZNF670-ZNF695F2Z2N8 137 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 ATP6V0E1O15342 81 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 IGLV1-51P01701 117 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
HDAC6-224ENST00000481929 IL3RAP26951 378 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 F2RL1P55085 397 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 YIPF7Q8N8F6 280 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 RTN4IP1Q8WWV3 396 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-224ENST00000481929 TMED9Q9BVK6 235 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 RHOFQ9HBH0 211 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 PARP11Q9NR21 331 aa11.48□□□□□ -0.57
HDAC6-224ENST00000481929 TRAV41A0A0B4J266 112 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 ZNF736B4DX44 427 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-224ENST00000481929 OCM2P0CE71 109 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-224ENST00000481929 OSMP13725 252 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 ATF1P18846 271 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 PRDX6P30041 224 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 SSTR5P35346 364 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 GK3PQ14409 553 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 PAN3Q58A45 887 aaKnown RBP11.47□□□□□ -0.57
HDAC6-224ENST00000481929 MBOAT4Q96T53 435 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 ZCCHC4Q9H5U6 513 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 NEK6Q9HC98 313 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
HDAC6-224ENST00000481929 LOC107986453A0A1B0GWG9 222 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 H0YJX3 145 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 TXNL1O43396 289 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 KRT8P05787 483 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 ATP6V1B2P21281 511 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 CDK5R1Q15078 307 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 MMDQ15546 238 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 RNLSQ5VYX0 342 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 TMEM236Q5W0B7 351 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 UTS2BQ765I0 119 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 GTSCR1Q86UQ5 136 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 LINC00311Q8N616 119 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 OR5D18Q8NGL1 313 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 SPSB1Q96BD6 273 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 FLYWCH2Q96CP2 140 aaKnown RBP11.46□□□□□ -0.57
HDAC6-224ENST00000481929 OPALINQ96PE5 141 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 SLC25A19Q9HC21 320 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 TVP23BQ9NYZ1 205 aa11.46□□□□□ -0.57
HDAC6-224ENST00000481929 SAXO1Q8IYX7 474 aa11.45□□□□□ -0.58
HDAC6-224ENST00000481929 MINDY2Q8NBR6 621 aa11.45□□□□□ -0.58
HDAC6-224ENST00000481929 ADAT3Q96EY9 351 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-224ENST00000481929 ZNF556Q9HAH1 456 aa11.45□□□□□ -0.58
HDAC6-224ENST00000481929 FAM118AQ9NWS6 357 aa11.45□□□□□ -0.58
HDAC6-224ENST00000481929 CLN6Q9NWW5 311 aa11.45□□□□□ -0.58
HDAC6-224ENST00000481929 CEPT1Q9Y6K0 416 aa11.45□□□□□ -0.58
HDAC6-224ENST00000481929 HECTD4Q9Y4D8 3996 aa11.44□□□□□ -0.58
HDAC6-224ENST00000481929 H0Y980 276 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms