RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 GLS2Q9UI32 602 aa13.37□□□□□ -0.27
RXRA-202ENST00000481739 SPEF1Q9Y4P9 236 aa13.37□□□□□ -0.27
RXRA-202ENST00000481739 PCNX1Q96RV3 2341 aa13.37□□□□□ -0.27
RXRA-202ENST00000481739 ANKRD34BA5PLL1 514 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 ADAP1O75689 374 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 TUSC2O75896 110 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 NXPH2O95156 264 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 ZNF44P15621 663 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 AADACP22760 399 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 FXYD4P59646 89 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 RND3P61587 244 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 NAAAQ02083 359 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 FAM27E3Q08E93 113 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 ESCO2Q56NI9 601 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 Q6P435 159 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 PRSS54Q6PEW0 395 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 SSX8Q7RTT4 187 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 OR5T2Q8NGG2 359 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 MRPL30Q8TCC3 161 aaKnown RBP13.36□□□□□ -0.27
RXRA-202ENST00000481739 ZNF488Q96MN9 340 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 HES4Q9HCC6 221 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 POLEQ07864 2286 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 RNF222A6NCQ9 220 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 SH2D1BO14796 132 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 NUP62P37198 522 aaPredicted RBP13.36□□□□□ -0.27
RXRA-202ENST00000481739 IL15RAQ13261 267 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 GAPTQ8N292 157 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 PHYHIPLQ96FC7 376 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 CABLES2Q9BTV7 478 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 ZFP57Q9NU63 452 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 FBXO9Q9UK97 447 aaPredicted RBP13.36□□□□□ -0.27
RXRA-202ENST00000481739 KALRNO60229 2985 aa13.36□□□□□ -0.27
RXRA-202ENST00000481739 NBASA2RRP1 2371 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 CACNA1BQ00975 2339 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 CDIPTO14735 213 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 DUSP1P28562 367 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 TMEM187Q14656 261 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 ALKBH6Q3KRA9 238 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 PAN3Q58A45 887 aaKnown RBP13.35□□□□□ -0.27
RXRA-202ENST00000481739 IGSF11Q5DX21 431 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 RGS7BPQ6MZT1 257 aaPredicted RBP13.35□□□□□ -0.27
RXRA-202ENST00000481739 LGI3Q8N145 548 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 RELL2Q8NC24 303 aaPredicted RBP13.35□□□□□ -0.27
RXRA-202ENST00000481739 RDH5Q92781 318 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 IGSF10Q6WRI0 2623 aa13.35□□□□□ -0.27
RXRA-202ENST00000481739 A0A1B0GW55 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 HS3ST1O14792 307 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 OR2H2O95918 312 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4L2P0CJ85 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4L3P0CJ86 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4L4P0CJ87 422 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4L5P0CJ88 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4L6P0CJ89 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4L7P0CJ90 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 S100GP29377 79 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 LIAT1Q6ZQX7 453 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 ZNF565Q8N9K5 539 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 TMEM165Q9HC07 324 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 MED9Q9NWA0 146 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 ELOVL5Q9NYP7 299 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 DUX4Q9UBX2 424 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 GPR31O00270 319 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 HSPB6O14558 160 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 MLNRO43193 412 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 CRYAAP02489 173 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 HOXB5P09067 269 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 OR5AC1P0C628 307 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 KCNJ3P48549 501 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 RPS23P62266 143 aaKnown RBP13.34□□□□□ -0.27
RXRA-202ENST00000481739 DCUN1D4Q92564 292 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 OR10C1Q96KK4 312 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 ARPC5LQ9BPX5 153 aa13.34□□□□□ -0.27
RXRA-202ENST00000481739 C16orf97H3BN30 126 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 SLC33A1O00400 549 aaPredicted RBP13.33□□□□□ -0.28
RXRA-202ENST00000481739 BET1O15155 118 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 SCTP09683 121 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 LMO1P25800 156 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 ZNF83P51522 516 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 IAH1Q2TAA2 248 aaPredicted RBP13.33□□□□□ -0.28
RXRA-202ENST00000481739 ZNF497Q6ZNH5 498 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 LDLRAD3Q86YD5 345 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 CMTM1Q8IZ96 169 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 ST8SIA2Q92186 375 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 KIRREL1Q96J84 757 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 RNF126Q9BV68 326 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 TMED3Q9Y3Q3 217 aa13.33□□□□□ -0.28
RXRA-202ENST00000481739 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 MPPED1O15442 326 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 RLN2P04090 185 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 GRPP07492 148 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 ZNF250P15622 560 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 GLRXP35754 106 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 SMCO1Q147U7 214 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 ATXN7L3Q14CW9 347 aaPredicted RBP13.32□□□□□ -0.28
RXRA-202ENST00000481739 HERPUD1Q15011 391 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 PHLDA2Q53GA4 152 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms