RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 TRGV10A0A0A0MS01 117 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 hADV38S2A0JD32 116 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 ODAMA1E959 279 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 DISC1C4P0D8 188 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 ADAM20O43506 726 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 LANCL1O43813 399 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 RAB3DO95716 219 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 IGHV4-39P01824 125 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 IFNA6P05013 189 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 HEXAP06865 529 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 AMY2BP19961 511 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 OR3A3P47888 321 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 CEBPDP49716 269 aaPredicted RBP8.46□□□□□ -1.06
USP39-215ENST00000481409 ATP5J2P56134 94 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 ARPC4P59998 168 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 MADCAM1Q13477 382 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 CDK10Q15131 360 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 HMGN3Q15651 99 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 CHRFAM7AQ494W8 412 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 FAM201AQ5SY85 155 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 BRICD5Q6PL45 260 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 PRSS57Q6UWY2 283 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 TGIF2LYQ8IUE0 185 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 ZNRF1Q8ND25 227 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 DEFB108BQ8NET1 73 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 TMEM185AQ8NFB2 350 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 OR10A7Q8NGE5 316 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 OR5H2Q8NGV7 314 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 PLPPR1Q8TBJ4 325 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 FAM168AQ92567 244 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 GCDHQ92947 438 aaPredicted RBP8.46□□□□□ -1.06
USP39-215ENST00000481409 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 CCL13Q99616 98 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 SLC25A21Q9BQT8 299 aaPredicted RBP8.46□□□□□ -1.06
USP39-215ENST00000481409 PATZ1Q9HBE1 687 aaKnown RBP8.46□□□□□ -1.06
USP39-215ENST00000481409 HRASLSQ9HDD0 168 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 DCAF16Q9NXF7 216 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 TAS2R3Q9NYW6 316 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 ZNF581Q9P0T4 197 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 ELF5Q9UKW6 265 aaPredicted RBP8.46□□□□□ -1.06
USP39-215ENST00000481409 TBC1D24Q9ULP9 559 aa8.46□□□□□ -1.06
USP39-215ENST00000481409 UBE2J1Q9Y385 318 aaPredicted RBP8.46□□□□□ -1.06
USP39-215ENST00000481409 LRRK2Q5S007 2527 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 MEIKINA0A087WXM9 373 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 ZNF729A6NN14 1252 aaPredicted RBP8.45□□□□□ -1.06
USP39-215ENST00000481409 CEACAM18A8MTB9 384 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 NPIPB11E5RHQ5 1161 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 F5H0A9 414 aaPredicted RBP8.45□□□□□ -1.06
USP39-215ENST00000481409 HSPB6O14558 160 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 PLA2G10O15496 165 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 FABP7O15540 132 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 SPINT2O43291 252 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 SSX4O60224 188 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 CD3DP04234 171 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 FCER2P06734 321 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 WNT2P09544 360 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 RPS2P15880 293 aaKnown RBP8.45□□□□□ -1.06
USP39-215ENST00000481409 SLC25A16P16260 332 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 COL8A1P27658 744 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 SLC6A1P30531 599 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 HLA-DRB3P79483 266 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 HTD2P86397 168 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 ATXN7L3Q14CW9 347 aaPredicted RBP8.45□□□□□ -1.06
USP39-215ENST00000481409 DMRTA1Q5VZB9 504 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 CD276Q5ZPR3 534 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 OVCH2Q7RTZ1 564 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 GVQW1Q8N7I0 195 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 DUSP18Q8NEJ0 188 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 SNAPC3Q92966 411 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 RAB39BQ96DA2 213 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 COQ2Q96H96 371 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 CABLES2Q9BTV7 478 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 TOLLIPQ9H0E2 274 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 DPAGT1Q9H3H5 408 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 LINC00574Q9H8X3 128 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 LINC00312Q9Y6C7 94 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 COL12A1Q99715 3063 aa8.45□□□□□ -1.06
USP39-215ENST00000481409 FAM240BA0A1B0GVZ2 78 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 MEIS3P1A6NDR6 274 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 LYNX1G3V0Z9 82 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 DVL1O14640 695 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 ZNF205O95201 554 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 RBP4P02753 201 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 LYNX1P0DP58 116 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 HLA-DMAP28067 261 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 HRH1P35367 487 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 GLP1RP43220 463 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 RFX2P48378 723 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 RAG2P55895 527 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 SEC61A1P61619 476 aaKnown RBP8.44□□□□□ -1.06
USP39-215ENST00000481409 AESQ08117 197 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 SURF2Q15527 256 aaPredicted RBP8.44□□□□□ -1.06
USP39-215ENST00000481409 DEFB113Q30KQ7 82 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 Q3ZCU0 254 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 RNASE12Q5GAN4 147 aaKnown RBP8.44□□□□□ -1.06
USP39-215ENST00000481409 LY6G6FQ5SQ64 297 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 DHRS11Q6UWP2 260 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 ZNF782Q6ZMW2 699 aaPredicted RBP8.44□□□□□ -1.06
USP39-215ENST00000481409 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
USP39-215ENST00000481409 OR4C16Q8NGL9 310 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms