RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 VSIG8P0DPA2 414 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 PRKACAP17612 351 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 OR3A4PP47883 348 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 INPP1P49441 399 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 KLRD1Q13241 179 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 PDCD1Q15116 288 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 SLC22A6Q4U2R8 563 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 C17orf107Q6ZR85 190 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 VMO1Q7Z5L0 202 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 LINC00596Q86U02 117 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 CMTM4Q8IZR5 234 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM58AQ8N1B3 248 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 MFSD4AQ8N468 514 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 PNKDQ8N490 385 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 ZNF561Q8N587 486 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 OR10K1Q8NGX5 313 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 SOSTQ9BQB4 213 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 SIRT7Q9NRC8 400 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 A0A0B4J203 849 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 K7N7A8 449 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 SULT1C2O00338 296 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 TCF21O43680 179 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 PSPNO60542 156 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 HTR3BO95264 441 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 MPIG6BO95866 241 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 HAND1O96004 215 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 LIPFP07098 398 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 GSTT2BP0CG30 244 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 AP3S2P59780 193 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 RPS27AP62979 156 aaKnown RBP10.03□□□□□ -0.8
PTPRF-213ENST00000481019 SSBP1Q04837 148 aaKnown RBP10.03□□□□□ -0.8
PTPRF-213ENST00000481019 SCN1BQ07699 218 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 ZNF273Q14593 569 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 C11orf91Q3C1V1 193 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 METTL11BQ5VVY1 283 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 TRIQKQ629K1 86 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM200BQ69YZ2 307 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 ELP2Q6IA86 826 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 HCP5Q6MZN7 132 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 Q6P435 159 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 TCF23Q7RTU1 214 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 FAM185AQ8N0U4 392 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 OSR2Q8N2R0 312 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 Q8N402 240 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 ZDHHC22Q8N966 263 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 Q8NFD4 153 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 OR4S1Q8NGB4 309 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 OR51T1Q8NGJ9 327 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 DEDD2Q8WXF8 326 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 TNFRSF14Q92956 283 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 LHX4Q969G2 390 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 CYYR1Q96J86 154 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 CHST6Q9GZX3 395 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 SCPEP1Q9HB40 452 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 SPACA1Q9HBV2 294 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 GLS2Q9UI32 602 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 MRPS7Q9Y2R9 242 aaKnown RBP10.03□□□□□ -0.8
PTPRF-213ENST00000481019 V9GYH0 126 aa10.03□□□□□ -0.8
PTPRF-213ENST00000481019 A0A1W2PQ09 198 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 A0A1W2PRD5 423 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 A0A1W2PRF3 423 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 A0A1W2PRM7 423 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 RNF212BA8MTL3 300 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 RNASEK-C17orf49H0YIS7 233 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 SIRPB1O00241 398 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 GPR37O15354 613 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 UPK1BO75841 260 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 MGMTP16455 207 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 CCL3L1P16619 93 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 SERPINA2P20848 420 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 CDK2P24941 298 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 OR3A1P47881 315 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 DLX6P56179 175 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 HILS1P60008 231 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 QRFPP83859 136 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF146Q15072 292 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 DEFB112Q30KQ8 113 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 NHLRC3Q5JS37 347 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 C9orf139Q6ZV77 190 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 OR8H2Q8N162 312 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 BPIFB2Q8N4F0 458 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 TEX29Q8N6K0 151 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 KIR3DL3Q8N743 410 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 TPRX1Q8N7U7 411 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 ASCC1Q8N9N2 400 aaKnown RBP10.02□□□□□ -0.81
PTPRF-213ENST00000481019 FCAMRQ8WWV6 532 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 DUX5Q96PT3 197 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 TM2D1Q9BX74 207 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 SELENOIQ9C0D9 397 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 SRRQ9GZT4 340 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 TAS2R8Q9NYW2 309 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 KPTNQ9Y664 436 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.81
PTPRF-213ENST00000481019 TRAV18A0A075B6X5 111 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 IGHV1-69DA0A0B4J2H0 117 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 A0A1W2PP11 408 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 CENPXA8MT69 81 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms