RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 DUX1O43812 170 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 IFNA5P01569 189 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 BCL2P10415 239 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 ZFP36L1Q07352 338 aaKnown RBP17.82■□□□□ 0.44
COL13A1-208ENST00000479733 SLC25A26Q70HW3 274 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 SSX7Q7RTT5 188 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 C17orf82Q86X59 251 aaPredicted RBP17.82■□□□□ 0.44
COL13A1-208ENST00000479733 TCAPO15273 167 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 SPINK2P20155 84 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 PAX9P55771 341 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 ERVS71-1P61550 626 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 ID3Q02535 119 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 RAET1LQ5VY80 246 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 CYB5R2Q6BCY4 276 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 OR5L2Q8NGL0 311 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 C10orf35Q96D05 121 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 TCFL5Q9UL49 500 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 ARHGAP21Q5T5U3 1957 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 A8MWP6 167 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 TK1P04183 234 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 CASP6P55212 293 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 LHFPL2Q6ZUX7 228 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 OR10A7Q8NGE5 316 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 PLPPR1Q8TBJ4 325 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 IER2Q9BTL4 223 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 SDF2L1Q9HCN8 221 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 LAMP3Q9UQV4 416 aa17.82■□□□□ 0.44
COL13A1-208ENST00000479733 A0A0G2JRQ6 117 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 FGF7P21781 194 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 JOSD1Q15040 202 aaPredicted RBP17.81■□□□□ 0.44
COL13A1-208ENST00000479733 DBX2Q6ZNG2 339 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 BEND4Q6ZU67 534 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 DKKL1Q9UK85 242 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 HMGB3O15347 200 aaKnown RBP17.81■□□□□ 0.44
COL13A1-208ENST00000479733 ZFAND5O76080 213 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 VDAC1P21796 283 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 RND2P52198 227 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 H3F3AP84243 136 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 P2RY6Q15077 328 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 NMSQ5H8A3 153 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 C10orf128Q5T292 105 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 ZNF468Q5VIY5 522 aaPredicted RBP17.81■□□□□ 0.44
COL13A1-208ENST00000479733 TMEM183AQ8IXX5 376 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 OR51H1Q8NH63 302 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 NEK7Q8TDX7 302 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 EXTL1Q92935 676 aa17.81■□□□□ 0.44
COL13A1-208ENST00000479733 CDCA3Q99618 268 aaPredicted RBP17.81■□□□□ 0.44
COL13A1-208ENST00000479733 IAPPP10997 89 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 B4GALT1P15291 398 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 RBM11P57052 281 aaKnown RBP17.8■□□□□ 0.44
COL13A1-208ENST00000479733 BAXQ07812 192 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 ZNF726P1Q15940 193 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 OR5R1Q8NH85 324 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 RASL10BQ96S79 203 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 TAAR3PQ9P1P4 343 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 EXPH5Q8NEV8 1989 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 XKRY2A2RUG3 117 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 ELLP55199 621 aaPredicted RBP17.8■□□□□ 0.44
COL13A1-208ENST00000479733 KIAA2026Q5HYC2 2103 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 WDR5BQ86VZ2 330 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 TMEM54Q969K7 222 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 OR14J1Q9UGF5 321 aa17.8■□□□□ 0.44
COL13A1-208ENST00000479733 NR2C1P13056 603 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 HNRNPKP61978 463 aaKnown RBP eCLIP17.79■□□□□ 0.44
COL13A1-208ENST00000479733 ZNF92Q03936 586 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 EXT1Q16394 746 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 TMEM211Q6ICI0 200 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 ZNF611Q8N823 705 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 SCGB1C1Q8TD33 95 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 WFIKKN1Q96NZ8 548 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 HS3ST6Q96QI5 342 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 HIST1H2AAQ96QV6 131 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 C2orf88Q9BSF0 95 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 DEFB126Q9BYW3 111 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 CHD3Q12873 2000 aaKnown RBP17.79■□□□□ 0.44
COL13A1-208ENST00000479733 A0A1W2PR77 199 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 SLC22A20A6NK97 555 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 METTL15P1P0C7V9 234 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 G0S2P27469 103 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 CD81P60033 236 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 HIST1H3AP68431 136 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 PNRC1Q12796 327 aaPredicted RBP17.79■□□□□ 0.44
COL13A1-208ENST00000479733 MAML2Q8IZL2 1156 aaPredicted RBP17.79■□□□□ 0.44
COL13A1-208ENST00000479733 GPR137CQ8N3F9 429 aa17.79■□□□□ 0.44
COL13A1-208ENST00000479733 CISD1Q9NZ45 108 aaKnown RBP17.79■□□□□ 0.44
COL13A1-208ENST00000479733 OPN1MWP04001 364 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 CELA2AP08217 269 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 MMP7P09237 267 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-208ENST00000479733 OPN1MW2P0DN77 364 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 OPN1MW3P0DN78 364 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 CEACAM1P13688 526 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 IL24Q13007 206 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 ZNF66Q6ZN08 573 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 H1FOOQ8IZA3 346 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-208ENST00000479733 OR1P1Q8NH06 330 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 TMEM37Q8WXS4 190 aa17.78■□□□□ 0.44
COL13A1-208ENST00000479733 SPACA9Q96E40 222 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-208ENST00000479733 RCC1LQ96I51 464 aaKnown RBP17.78■□□□□ 0.44
COL13A1-208ENST00000479733 ALKBH3Q96Q83 286 aaPredicted RBP17.78■□□□□ 0.44
COL13A1-208ENST00000479733 RBKSQ9H477 322 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms