RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 CLEC18BQ6UXF7 455 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 FAM231DQ6ZW35 169 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 SLC35D2Q76EJ3 337 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 OR2W3Q7Z3T1 314 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 TAC4Q86UU9 113 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 SLC13A5Q86YT5 568 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 CLVS1Q8IUQ0 354 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 ARHGAP18Q8N392 663 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 EIF4E3Q8N5X7 224 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 NATD1Q8N6N6 113 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 OR4K2Q8NGD2 314 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 OR13C9Q8NGT0 318 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 OR5H2Q8NGV7 314 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 DYDC1Q8WWB3 177 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 GTF2H4Q92759 462 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 CIDECQ96AQ7 238 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 DGCR14Q96DF8 476 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 CMTM5Q96DZ9 223 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 PACRGQ96M98 296 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 MBOAT7Q96N66 472 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 C7orf50Q9BRJ6 194 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 THTPAQ9BU02 230 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 TM6SF2Q9BZW4 377 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 SRRQ9GZT4 340 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 IL22Q9GZX6 179 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 METTL8Q9H825 291 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 RDH14Q9HBH5 336 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 PARVBQ9HBI1 364 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 RBM22Q9NW64 420 aaKnown RBP eCLIP1.28□□□□□ -2.2
VPS50-213ENST00000477572 MRM2Q9UI43 246 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 PRO0628Q9UI54 55 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 C3orf18Q9UK00 162 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 GINS2Q9Y248 185 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 ERGIC3Q9Y282 383 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 KLF13Q9Y2Y9 288 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 TBL2Q9Y4P3 447 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 TRAPPC1Q9Y5R8 145 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 ZNF706Q9Y5V0 76 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 KPTNQ9Y664 436 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 URGCP-MRPS24S4R325 110 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 RFX7Q2KHR2 1363 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 OTOFQ9HC10 1997 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 CHD5Q8TDI0 1954 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 A0A0A6YYH2 397 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 MGAT4DA6NG13 374 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 A6NJ64 397 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 GGTLC3B5MD39 225 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 TMEM238C9JI98 176 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 C9JQL5 133 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 E5RI56 91 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 LRRN3E7EW58 273 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 E7EWF7 191 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 ISLRO14498 428 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 GMDSO60547 372 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 OR2A4O95047 310 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 DHFRP00374 187 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 GP1BAP07359 652 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 RPS17P08708 135 aaKnown RBP1.27□□□□□ -2.21
VPS50-213ENST00000477572 CBR1P16152 277 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 CRABP2P29373 138 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 FUSP35637 526 aaKnown RBP eCLIP1.27□□□□□ -2.21
VPS50-213ENST00000477572 P2RY2P41231 377 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 SPCS3P61009 180 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 VSNL1P62760 191 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 MGAT3Q09327 533 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 IFFO1Q0D2I5 559 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 PSG3Q16557 428 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 NDUFA5Q16718 116 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 FAM151BQ6UXP7 276 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 PID1Q7Z2X4 250 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 S100A7AQ86SG5 101 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 FUNDC1Q8IVP5 155 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 AMN1Q8IY45 258 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 C10orf67Q8IYJ2 551 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 ZFP82Q8N141 532 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 C17orf78Q8N4C9 275 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 TMEM156Q8N614 296 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 FBXO36Q8NEA4 188 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 OR5T3Q8NGG3 340 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 OR8K1Q8NGG5 319 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 OR6K6Q8NGW6 343 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 OR8S1Q8NH09 359 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 LZICQ8WZA0 190 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 CCDC42Q96M95 316 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 SPACA5Q96QH8 159 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 OR2A7Q96R45 310 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 METTL26Q96S19 204 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 C20orf144Q9BQM9 153 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 MED10Q9BTT4 135 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 TMED9Q9BVK6 235 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 BCL2L14Q9BZR8 327 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 SLC38A1Q9H2H9 487 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 C6orf50Q9HD87 102 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 DIABLOQ9NR28 239 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 C19orf12Q9NSK7 152 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 STMN3Q9NZ72 180 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 FLVCR2Q9UPI3 526 aa1.27□□□□□ -2.21
VPS50-213ENST00000477572 ZFYVE9O95405 1425 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 LRPPRCP42704 1394 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms