RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 HBE1P02100 147 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF17P17021 662 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 NDUFA6P56556 154 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 FAM3AP98173 230 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 MAJINQ3KP22 176 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 CALHM1Q8IU99 346 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 OR1K1Q8NGR3 316 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 SLC26A1Q9H2B4 701 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 MMP26Q9NRE1 261 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 PSG11Q9UQ72 335 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.55□□□□□ -0.883e-14■□□□□ 8.7
COL27A1-204ENST00000477421 TRAV17A0A0B4J275 112 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 UBE2L5PA0A1B0GUS4 154 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 OR2C1O95371 312 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 RD3LP0DJH9 198 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 BTF3P20290 206 aaKnown RBP9.55□□□□□ -0.88
COL27A1-204ENST00000477421 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-204ENST00000477421 RUNX1Q01196 453 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 FAM24BQ8N5W8 94 aa9.55□□□□□ -0.88
COL27A1-204ENST00000477421 GPR12P47775 334 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 FGF8P55075 233 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF154Q13106 437 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF826PQ6ZT77 177 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 OVCH2Q7RTZ1 564 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 MRGPRFQ96AM1 343 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 RIMS4Q9H426 269 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 TAAR3PQ9P1P4 343 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 DOPEY2Q9Y3R5 2298 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 TMEM265A0A087WTH1 108 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 LRP5LA4QPB2 252 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 NPIPB13A6NJU9 1138 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 NPIPB4C9JG80 1138 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 ABCD4O14678 606 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 ENSAO43768 121 aaKnown RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 FHITP49789 147 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 SURF2Q15527 256 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 IGFBP7Q16270 282 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 NUFIP2Q7Z417 695 aaKnown RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 SCCPDHQ8NBX0 429 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 SLC25A40Q8TBP6 338 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 GNPNAT1Q96EK6 184 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 DEPPQ9NTK1 212 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 PRELID3BQ9Y3B1 194 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 CXorf66Q5JRM2 361 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 TECTBQ96PL2 329 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 OR2D2Q9H210 308 aa9.54□□□□□ -0.88
COL27A1-204ENST00000477421 LIN7CQ9NUP9 197 aaKnown RBP9.54□□□□□ -0.88
COL27A1-204ENST00000477421 FREM1Q5H8C1 2179 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 TTLL8A6PVC2 850 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 CEBPDP49716 269 aaPredicted RBP9.53□□□□□ -0.88
COL27A1-204ENST00000477421 FOXG1P55316 489 aaPredicted RBP9.53□□□□□ -0.88
COL27A1-204ENST00000477421 RAB31Q13636 194 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 KIAA0141Q14154 515 aaPredicted RBP9.53□□□□□ -0.88
COL27A1-204ENST00000477421 LY6G6FQ5SQ64 297 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 FBXW9Q5XUX1 488 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 Q96M66 194 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 SSX3Q99909 188 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 IL36RNQ9UBH0 155 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 KIF26AQ9ULI4 1882 aaPredicted RBP9.53□□□□□ -0.88
COL27A1-204ENST00000477421 MUC6Q6W4X9 2439 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 TRAV14DV4A0A0A6YYC5 116 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 DNPH1O43598 174 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 OPN1MWP04001 364 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 SLC25A4P12235 298 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 MPGP29372 298 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 LPAR6P43657 344 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 Q3ZCU0 254 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 SLC23A3Q6PIS1 610 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF610Q8N9Z0 462 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 OR10P1Q8NGE3 313 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 FGFBP3Q8TAT2 258 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 PFDN5Q99471 154 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 ARV1Q9H2C2 271 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF552Q9H707 407 aaPredicted RBP9.53□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF71Q9NQZ8 489 aaPredicted RBP9.53□□□□□ -0.88
COL27A1-204ENST00000477421 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 ZNF727A8MUV8 499 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 HNF1AP20823 631 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 DYNLT3P51808 116 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 PLGLAQ15195 96 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 LYZL4Q96KX0 146 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 HEXA-AS1Q9H8Q6 139 aa9.53□□□□□ -0.88
COL27A1-204ENST00000477421 A0A0A6YYD4 124 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 C21orf140B9A014 251 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 MBPP02686 304 aaPredicted RBP9.52□□□□□ -0.88
COL27A1-204ENST00000477421 DTYMKP23919 212 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 UBE2G2P60604 165 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 AESQ08117 197 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 MZT1Q08AG7 82 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 HIST2H3AQ71DI3 136 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 PUSL1Q8N0Z8 303 aaKnown RBP9.52□□□□□ -0.88
COL27A1-204ENST00000477421 OR52M1Q8NGK5 317 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 TLNRD1Q9H1K6 362 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms