RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 SPSB1Q96BD6 273 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 MYOTQ9UBF9 498 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 GOLT1BQ9Y3E0 138 aa13.2□□□□□ -0.3
CLSTN1-205ENST00000477264 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 VPS13AQ96RL7 3174 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 NR2C1P13056 603 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 MPLP40238 635 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 EXT1Q16394 746 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 NCR3LG1Q68D85 454 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 GUSBP11Q6P575 273 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 MEX3BQ6ZN04 569 aaKnown RBP13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 MRGPRGQ86SM5 289 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 METTL27Q8N6F8 245 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF441Q8N8Z8 693 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 NPRL2Q8WTW4 380 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 NAT6Q93015 286 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 TP53RKQ96S44 253 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 RP1P56715 2156 aa13.19□□□□□ -0.3
CLSTN1-205ENST00000477264 YLPM1P49750 1951 aaKnown RBP13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 VSTM2BA6NLU5 285 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 MPPED1O15442 326 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 OMGP23515 440 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 CFHR1Q03591 330 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF695Q8IW36 515 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM123Q8N131 208 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF845Q96IR2 970 aaPredicted RBP13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 LOXL4Q96JB6 756 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 BTF3L4Q96K17 158 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 PSMG3Q9BT73 122 aaPredicted RBP13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 EMC6Q9BV81 110 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 B3GAT1Q9P2W7 334 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 ONECUT2O95948 504 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 RUNX1Q01196 453 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 BTNL3Q6UXE8 466 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 KMT5CQ86Y97 462 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 MRPL41Q8IXM3 137 aaKnown RBP13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 ATG101Q9BSB4 218 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 LAMP3Q9UQV4 416 aa13.18□□□□□ -0.3
CLSTN1-205ENST00000477264 B4E171 279 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 RER1O15258 196 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 TYMSP04818 313 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 TSPAN7P41732 249 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ID3Q02535 119 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ACTL10Q5JWF8 245 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF880Q6PDB4 577 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF66Q6ZN08 573 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF573Q86YE8 665 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 IL22RA2Q969J5 263 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 LIN37Q96GY3 246 aaPredicted RBP13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 NUDT22Q9BRQ3 303 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 FAAP24Q9BTP7 215 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 GPR173Q9NS66 373 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 UBE2J1Q9Y385 318 aaPredicted RBP13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 DMDP11532 3685 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 TTC28Q96AY4 2481 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 LY6G6EA0A0G2JKS1 128 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 TOX3O15405 576 aaPredicted RBP13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 HRASP01112 189 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 FGF5P12034 268 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 UCP1P25874 307 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 NPBWR2P48146 333 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 C17orf67Q0P5P2 114 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 CLN3Q13286 438 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ANKRD39Q53RE8 183 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 C16orf82Q7Z2V1 217 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ODF3L1Q8IXM7 274 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 OR11L1Q8NGX0 322 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 SEMA5BQ9P283 1151 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 U3KQA8 63 aa13.17□□□□□ -0.3
CLSTN1-205ENST00000477264 H7BYZ3 331 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 CST2P09228 141 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 FAHP16930 419 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 OPRM1P35372 400 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 GALR1P47211 349 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 WDR25Q64LD2 544 aaPredicted RBP13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 SLC25A24Q6NUK1 477 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 SELENOHQ8IZQ5 122 aaKnown RBP13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 CISD2Q8N5K1 135 aaKnown RBP13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 OR1N1Q8NGS0 311 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 PIGTQ969N2 578 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 ANAPC16Q96DE5 110 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
CLSTN1-205ENST00000477264 FAM221AA4D161 298 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms