RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 MRPS28Q9Y2Q9 187 aaKnown RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 ZNF780BQ9Y6R6 833 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 CCDC88CQ9P219 2028 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 NUP205Q92621 2012 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 DAPL1A0PJW8 107 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 NPEPPSL1A6NEC2 478 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 PRSS29PA6NIE9 313 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 SH2D7A6NKC9 451 aaPredicted RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 J3QRE1 110 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 K7EP34 96 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 SIRPB1O00241 398 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 DUX1O43812 170 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 CEACAM4O75871 244 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 C1QL1O75973 258 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 VENTXO95231 258 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 CPSF4O95639 269 aaKnown RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 ACP5P13686 325 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 SLC6A6P31641 620 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 PTGER1P34995 402 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 PRSS3P35030 304 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 MDH2P40926 338 aaKnown RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 GALR1P47211 349 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 EFNA5P52803 228 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 SNU13P55769 128 aaKnown RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 TMPRSS3P57727 454 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 ACVR1Q04771 509 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 FUT5Q11128 374 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 EIF2B1Q14232 305 aaKnown RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 MSMO1Q15800 293 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 ADIRFQ15847 76 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 PCK2Q16822 640 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 HLA-BQ31612 363 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 ALG10Q5BKT4 473 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 DCST2Q5T1A1 773 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 DMKNQ6E0U4 476 aaPredicted RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 FOXI2Q6ZQN5 318 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 LCNL1Q6ZST4 164 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 Q6ZVL8 140 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 FA2HQ7L5A8 372 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 Q8N976 141 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 OR10V1Q8NGI7 309 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 OR51G1Q8NGK1 321 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 OR4L1Q8NH43 312 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 MAFAQ8NHW3 353 aaPredicted RBP3.59□□□□□ -1.83
CD55-208ENST00000476590 ZNF563Q8TA94 476 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 OCC1Q8TAD7 63 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 NRGNQ92686 78 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 PIGTQ969N2 578 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 PGLYRP3Q96LB9 341 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 DUX5Q96PT3 197 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 NPY6RQ99463 290 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 NDFIP1Q9BT67 221 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 EFCAB11Q9BUY7 163 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 S1PR5Q9H228 398 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 MFSD1Q9H3U5 465 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 SDF2L1Q9HCN8 221 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 MANBALQ9NQG1 85 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 CMC2Q9NRP2 79 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 ARL15Q9NXU5 204 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 OR5V1Q9UGF6 321 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 AK3Q9UIJ7 227 aa3.59□□□□□ -1.83
CD55-208ENST00000476590 IGLV3-22A0A075B6J6 115 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 OOEPA6NGQ2 149 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 K7N7A8 449 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 SAP18O00422 153 aaKnown RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 DHHO43323 396 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 NUPR1O60356 82 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 CYB5AP00167 134 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 NRASP01111 189 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 HRASP01112 189 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 IGHG4P01861 327 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 HLA-HP01893 362 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 GLI3P10071 1580 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 CD33P20138 364 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 ACP1P24666 158 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 FCGR2CP31995 323 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 PGFP49763 221 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 TAS2R31P59538 309 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 TAS2R50P59544 299 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 MRPS34P82930 218 aaKnown RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 ELOCQ15369 112 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 PMCHL1Q16048 86 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 ACKR1Q16570 336 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 POU2AF1Q16633 256 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 RALGAPA2Q2PPJ7 1873 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 DCAF4L1Q3SXM0 396 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 KIAA1644Q3SXP7 199 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 ENTPD8Q5MY95 495 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 BVES-AS1Q5T3Y7 98 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 MRPL54Q6P161 138 aaKnown RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 TRIM40Q6P9F5 258 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 Q7L0L9 218 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 OR2T10Q8NGZ9 312 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 OR8S1Q8NH09 359 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 FAM213BQ8TBF2 198 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 MARCH1Q8TCQ1 289 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 HOXB13Q92826 284 aaPredicted RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 MAL2Q969L2 176 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 FGGYQ96C11 551 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms