RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SYT7O43581 403 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 SCGNO76038 276 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 HPNP05981 417 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 SEC11BP0C7V7 166 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 FPR2P25090 351 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 P2RY1P47900 373 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 SNU13P55769 128 aaKnown RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 RAB35Q15286 201 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TRAT1Q6PIZ9 186 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 COMMD1Q8N668 190 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 OR2G3Q8NGZ4 309 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TMEM171Q8WVE6 324 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TOMM40LQ969M1 308 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 HIST1H2AAQ96QV6 131 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 CITED2Q99967 270 aaPredicted RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 GINS3Q9BRX5 216 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 NIPSNAP3BQ9BS92 247 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 PHF7Q9BWX1 381 aaPredicted RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 ARV1Q9H2C2 271 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 DECR2Q9NUI1 292 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 UNC13CQ8NB66 2214 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 IGLV3-32A0A0A0MS00 114 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 FAM24AA6NFZ4 105 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 GZMHP20718 246 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ATP6V0CP27449 155 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 RBMXP38159 391 aaKnown RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 OR3A2P47893 321 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 RAB11AP62491 216 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ZFP36L1Q07352 338 aaKnown RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 CALHM1Q8IU99 346 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TMEM217Q8N7C4 229 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TMEM37Q8WXS4 190 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ST8SIA1Q92185 356 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TVP23CQ96ET8 276 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ADGRG7Q96K78 797 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 HINT2Q9BX68 163 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ZNF701Q9NV72 531 aaPredicted RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 AK3Q9UIJ7 227 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 LMO7DNF2Z398 122 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 H3BML4 177 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 DVL1O14640 695 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 TBPP20226 339 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 MC5RP33032 325 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ALDH3B1P43353 468 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ARF1P84077 181 aaKnown RBP7.25□□□□□ -1.25
VAPB-205ENST00000476395 RTP5Q14D33 572 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 FAM69BQ5VUD6 431 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 ANKRD37Q7Z713 158 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 SGPP2Q8IWX5 399 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 SLC25A45Q8N413 288 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 OR1P1Q8NH06 330 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 HAS2Q92819 552 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 R3HDM4Q96D70 268 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 CALHM2Q9HA72 323 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 GPR84Q9NQS5 396 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 FIGNL2A6NMB9 653 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 NPIPA5E9PKD4 350 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 M0QZK8 103 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 NUPR1O60356 82 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 FGF5P12034 268 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 ZNF823P16415 610 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 FBLP22087 321 aaKnown RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 OR3A1P47881 315 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 DAP3P51398 398 aaKnown RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 BLKP51451 505 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 TLE3Q04726 772 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SHISA2Q6UWI4 295 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 MRPL41Q8IXM3 137 aaKnown RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 C1orf87Q8N0U7 546 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 NOXO1Q8NFA2 376 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 NABP1Q96AH0 204 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 MAGT1Q9H0U3 335 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 LPAR2Q9HBW0 351 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 PITPNC1Q9UKF7 332 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 NPIPA1Q9UND3 350 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 MRPS28Q9Y2Q9 187 aaKnown RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 TNRC6BQ9UPQ9 1833 aaKnown RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 ZFP92A6NM28 416 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SCGB1D1O95968 90 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 CEACAM1P13688 526 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 CD1BP29016 333 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 FGF8P55075 233 aaPredicted RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 HNF4GQ14541 408 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SHBQ15464 509 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 MPV17LQ2QL34 196 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 PHLDA2Q53GA4 152 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 DCAF10Q5QP82 559 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 ABLIM2Q6H8Q1 611 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 FAM180AQ6UWF9 173 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SLC16A14Q7RTX9 510 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SLC35E3Q7Z769 313 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 OR5D14Q8NGL3 314 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 DYRK2Q92630 601 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 DAZLQ92904 295 aaKnown RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 ZNF479Q96JC4 524 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 ZNF2Q9BSG1 426 aaPredicted RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 CABLES2Q9BTV7 478 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 ACTR3CQ9C0K3 210 aaPredicted RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 ZNF430Q9H8G1 570 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms