RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 SP6Q3SY56 376 aa13.7□□□□□ -0.22
VARS2-207ENST00000476162 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
VARS2-207ENST00000476162 FOXRED2Q8IWF2 684 aa13.7□□□□□ -0.22
VARS2-207ENST00000476162 RPS10P5Q9NQ39 176 aa13.7□□□□□ -0.22
VARS2-207ENST00000476162 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
VARS2-207ENST00000476162 MTCH1Q9NZJ7 389 aa13.7□□□□□ -0.22
VARS2-207ENST00000476162 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
VARS2-207ENST00000476162 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
VARS2-207ENST00000476162 LILRA1O75019 489 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
VARS2-207ENST00000476162 SPINK2P20155 84 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 SOX8P57073 446 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 FGF12P61328 243 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 ABCA11PQ4W5N1 156 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 PHLDA2Q53GA4 152 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 LBHQ53QV2 105 aaPredicted RBP13.69□□□□□ -0.22
VARS2-207ENST00000476162 TMED6Q8WW62 240 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 RTN4IP1Q8WWV3 396 aaPredicted RBP13.69□□□□□ -0.22
VARS2-207ENST00000476162 BCL2L2Q92843 193 aaPredicted RBP13.69□□□□□ -0.22
VARS2-207ENST00000476162 EXTL1Q92935 676 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 IL36RNQ9UBH0 155 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 ARHGAP21Q5T5U3 1957 aa13.69□□□□□ -0.22
VARS2-207ENST00000476162 hCG_1809904A0A1W2PP81 198 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 A0A1W2PPH5 198 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 A0A1W2PR64 198 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 A0A1W2PRV1 198 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 CDRT15L2A8MXV6 281 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 IFNA10P01566 189 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 FTH1P19P0C7X4 201 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 PET100P0DJ07 73 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 CCL11P51671 97 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 KRBOX4Q5JUW0 171 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 SAXO1Q8IYX7 474 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 MRPL24Q96A35 216 aaKnown RBP13.68□□□□□ -0.22
VARS2-207ENST00000476162 POM121Q96HA1 1249 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 AQP10Q96PS8 301 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 HIST1H2AAQ96QV6 131 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 LPAR3Q9UBY5 353 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 KCNIP3Q9Y2W7 256 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 MEMO1Q9Y316 297 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 FRYQ5TBA9 3013 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 FAM157AC9JC47 383 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 C9JQL5 133 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 SYNGR1O43759 233 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 YIF1AO95070 293 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 OR5AC1P0C628 307 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 CD82P27701 267 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 CDX1P47902 265 aaPredicted RBP13.68□□□□□ -0.22
VARS2-207ENST00000476162 GGNBP1Q5YKI7 109 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 ADAM5Q6NVV9 412 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 UNQ6494/PRO21346Q6UXR6 183 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 MDP1Q86V88 176 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 OR5A2Q8NGI9 324 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 ISOC2Q96AB3 205 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 HRH4Q9H3N8 390 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 NAA60Q9H7X0 242 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 SLC2A9Q9NRM0 540 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 OTOGLQ3ZCN5 2332 aa13.68□□□□□ -0.22
VARS2-207ENST00000476162 ASPMQ8IZT6 3477 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A10PA6NDY2 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 BTBD17A6NE02 478 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A18PA6NE21 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A16PA6NEW6 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A20PA6NIJ5 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A8PA6NJQ4 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A7PA6NKC0 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A22PA8MWA6 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A12PA8MX19 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A5PA8MXJ8 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A23PA8MXZ1 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 TCAPO15273 167 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 IFNA21P01568 189 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A15PP0C7V4 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A13PP0C7W8 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A14PP0C7W9 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FAM90A24PP0C7X0 464 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 GLI4P10075 376 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 DUSP1P28562 367 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 DDTP30046 118 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 OR2B8PP59922 312 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 OR5P3Q8WZ94 311 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 MOB3AQ96BX8 217 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 MISP3Q96FF7 219 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 TRAPPC2LH3BP13 241 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 HSPB6O14558 160 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 AADACP22760 399 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 TMEM187Q14656 261 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 ZNF585AQ6P3V2 769 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 C5orf24Q7Z6I8 188 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 C1QL4Q86Z23 238 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 MKXQ8IYA7 352 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 FDCSPQ8NFU4 85 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 OR11L1Q8NGX0 322 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 SAT2Q96F10 170 aaPredicted RBP13.67□□□□□ -0.22
VARS2-207ENST00000476162 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 SMIM8Q96KF7 97 aa13.67□□□□□ -0.22
VARS2-207ENST00000476162 CNTNAP3Q9BZ76 1288 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms