RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 KIF25Q9UIL4 384 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ANXA10Q9UJ72 324 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ABCA4P78363 2273 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 CHD6Q8TD26 2715 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 hADV38S2A0JD32 116 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 TRDCB7Z8K6 153 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 M0QYG6 137 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 OVOL3O00110 214 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 NDUFS8O00217 210 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 PSPNO60542 156 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 RP2O75695 350 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 FSTL3O95633 263 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 DIRAS3O95661 229 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 IGHV2-70P01814 119 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 PMP2P02689 132 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 NPY4RP50391 375 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 P2RX3P56373 397 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 HERV-K104P61576 105 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 SEC61A1P61619 476 aaKnown RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 HOXA4Q00056 320 aaPredicted RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 KLF9Q13886 244 aaPredicted RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 SRSF7Q16629 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 ESCO2Q56NI9 601 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 ATPAF1Q5TC12 328 aaPredicted RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 OR52W1Q6IF63 320 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 C17orf107Q6ZR85 190 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 RTN4RL2Q86UN3 420 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 OR4C16Q8NGL9 310 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 OR4A4PQ8NGN8 299 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 PLPPR1Q8TBJ4 325 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 MRPL30Q8TCC3 161 aaKnown RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 IL1F10Q8WWZ1 152 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 DACT3Q96B18 629 aaPredicted RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 NEIL1Q96FI4 390 aaPredicted RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 SCGB3A2Q96PL1 93 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 PSMG3-AS1Q96PY0 264 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 C11orf54Q9H0W9 315 aaPredicted RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 GAL3ST2Q9H3Q3 398 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 NARFLQ9H6Q4 476 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 HRASLSQ9HDD0 168 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 Q9N2K0 584 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 CLN8Q9UBY8 286 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF222Q9UK12 451 aa8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 RBM7Q9Y580 266 aaKnown RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 SMG1Q96Q15 3661 aaKnown RBP8.58□□□□□ -1.04
PRPF38A-202ENST00000474048 RELNP78509 3460 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 TRBV6-6A0A0A6YYG2 114 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ODAMA1E959 279 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 CEACAM18A8MTB9 384 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 BET1O15155 118 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 FABP7O15540 132 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 NAPSAO96009 420 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 TFF1P04155 84 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 S100GP29377 79 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ERP29P30040 261 aaKnown RBP8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ECI1P42126 302 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 GNB2P62879 340 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 RBMS2Q15434 407 aaKnown RBP8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 RSBN1Q5VWQ0 802 aaPredicted RBP8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 C11orf88Q6PI97 169 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 DNM1P46Q6ZS02 220 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF554Q86TJ5 538 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 FAM185AQ8N0U4 392 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF295-AS1Q8N0V1 137 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF525Q8N782 197 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 OR6F1Q8NGZ6 308 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 OR10J5Q8NHC4 309 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 MRGPRDQ8TDS7 321 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 GALMQ96C23 342 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 KAAG1Q9UBP8 84 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 TBC1D24Q9ULP9 559 aa8.57□□□□□ -1.04
PRPF38A-202ENST00000474048 ADGRG4Q8IZF6 3080 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 TRBV23-1A0A0A0MS06 115 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 hCG_1809904A0A1W2PP81 198 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 A0A1W2PPE2 198 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 A0A1W2PR64 198 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 A0A1W2PRV1 198 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 FAM172BPA6NC97 362 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 DVL1O14640 695 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 NDUFS7O75251 213 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF737O75373 536 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 RGS11O94810 467 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 IGHV4-39P01824 125 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 OR5H8P0DN80 308 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 PGAM2P15259 253 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 NAT1P18440 290 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 GZMHP20718 246 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 GIFP27352 417 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 GLIPR1P48060 266 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 IFITM3Q01628 133 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 MEF2CQ06413 473 aaPredicted RBP8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 VAX1Q5SQQ9 334 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 CD276Q5ZPR3 534 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 FAAP20Q6NZ36 180 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms