RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NUDT9Q9BW91 350 aa4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 PARLQ9H300 379 aa4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 GEMIN7Q9H840 131 aaKnown RBP4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 MANBALQ9NQG1 85 aa4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 AK3Q9UIJ7 227 aa4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC13A4Q9UKG4 626 aa4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 ICAM5Q9UMF0 924 aa4.43□□□□□ -1.7
TMEM39A-206ENST00000473684 SMIM28A0A1B0GU29 152 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 A0A1B0GV50 99 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ODAMA1E959 279 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC25A14O95258 325 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 THY1P04216 161 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 TACSTD2P09758 323 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 F3P13726 295 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PIGPP57054 158 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 RPL15P61313 204 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PSG9Q00887 426 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ADIPOQQ15848 244 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 IAH1Q2TAA2 248 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ALG10Q5BKT4 473 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 WDR25Q64LD2 544 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF776Q68DI1 518 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 CYP2G1PQ6ZSU1 146 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF627Q7L945 461 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC16A9Q7RTY1 509 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 LINC00346Q8IVM7 164 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF440Q8IYI8 595 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZIC4Q8N9L1 334 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZMYND19Q96E35 227 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF681Q96N22 645 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR51I2Q9H344 312 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 WNT16Q9UBV4 365 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 TBC1D29Q9UFV1 150 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 GPR132Q9UNW8 380 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PXMP4Q9Y6I8 212 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 IGKV6-21A0A0C4DH24 114 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 A0A1B0GW15 77 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 SIRPB1O00241 398 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 CD5LO43866 347 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PDE6DO43924 150 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 EPPINO95925 133 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 MAS1P04201 325 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 REG1AP05451 166 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 IL9P15248 144 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 LMO2P25791 158 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 UCP1P25874 307 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PSMB5P28074 263 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR1D2P34982 312 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 BUD31P41223 144 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PNPLA4P41247 253 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 NPBWR2P48146 333 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 DUSP3P51452 185 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF134P52741 427 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 MLF1P58340 268 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PLP1P60201 277 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 CXCL9Q07325 125 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PMCHL1Q16048 86 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ANKRD55Q3KP44 614 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 PHYHD1Q5SRE7 291 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 FAM166AQ6J272 317 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 WDR74Q6RFH5 385 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 Q7L0L9 218 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 MRGPRGQ86SM5 289 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 Q8N976 141 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR4F17Q8NGA8 305 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR10G3Q8NGC4 313 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR4N2Q8NGD1 307 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR2G3Q8NGZ4 309 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 FNDC9Q8TBE3 224 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 RAB1CQ92928 201 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 RAB8BQ92930 207 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 TMEM230Q96A57 120 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 WDYHV1Q96HA8 205 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 UHRF2Q96PU4 802 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 OR4F4Q96R69 305 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 HINT2Q9BX68 163 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 SH3BGRL3Q9H299 93 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 METTL7AQ9H8H3 244 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 C1orf123Q9NWV4 160 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 MRM2Q9UI43 246 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 RNF114Q9Y508 228 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 TRAPPC1Q9Y5R8 145 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 LCTP09848 1927 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 HEATR5AQ86XA9 2040 aa4.42□□□□□ -1.7
TMEM39A-206ENST00000473684 ADAMTS20P59510 1910 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PLXND1Q9Y4D7 1925 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 TRAV34A0A0B4J273 112 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 IGLON5A6NGN9 336 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 DDTLA6NHG4 134 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 ARPC3O15145 178 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 MPPED1O15442 326 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 NUPR1O60356 82 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF253O75346 499 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 BRI3O95415 125 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 GCH1P30793 250 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 GUCA1AP43080 201 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF117Q03924 483 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 HSD52Q0P140 79 aa4.41□□□□□ -1.7
TMEM39A-206ENST00000473684 PMPCAQ10713 525 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms