RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 LTC4SQ16873 150 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 OR2G6Q5TZ20 316 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 TMPRSS11AQ6ZMR5 421 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 OR4X2Q8NGF9 303 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 RFESDQ8TAC1 157 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 PHF21AQ96BD5 680 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 NECAP2Q9NVZ3 263 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 SMPD3Q9NY59 655 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-213ENST00000471978 ING4Q9UNL4 249 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 PSG11Q9UQ72 335 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 ST3GAL6Q9Y274 331 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 TSSC4Q9Y5U2 329 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-213ENST00000471978 NPIPB11E5RHQ5 1161 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 PPP3R1P63098 170 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 THNSL2Q86YJ6 484 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 SUMF2Q8NBJ7 301 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 WFDC9Q8NEX5 89 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 MYDGFQ969H8 173 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 RDH12Q96NR8 316 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 DPCDQ9BVM2 203 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-213ENST00000471978 METTL9Q9H1A3 318 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 TMEM138Q9NPI0 162 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 ZNF581Q9P0T4 197 aa17.94■□□□□ 0.46
C9orf3-213ENST00000471978 TRAV39A0A0B4J263 110 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A18PA6NE21 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A16PA6NEW6 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A20PA6NIJ5 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A9PA6NNJ1 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A12PA8MX19 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A5PA8MXJ8 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 PIN1P1O15428 100 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 SNRNP70P08621 437 aaKnown RBP17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A15PP0C7V4 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A13PP0C7W8 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A14PP0C7W9 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 FAM90A24PP0C7X0 464 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 SSTR5P35346 364 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 ZNF93P35789 620 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-213ENST00000471978 GNG10P50151 68 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 MADCAM1Q13477 382 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 DDI2Q5TDH0 399 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 C10orf99Q6UWK7 81 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 OSR2Q8N2R0 312 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 OR56B4Q8NH76 319 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 MRAPQ8TCY5 172 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 BABAM2Q9NXR7 383 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 ZNF281Q9Y2X9 895 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 MOB4Q9Y3A3 225 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 SIRT4Q9Y6E7 314 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-213ENST00000471978 HSPE1-MOB4S4R3N1 261 aa17.93■□□□□ 0.46
C9orf3-213ENST00000471978 IRGMA1A4Y4 181 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 OR7C1O76099 320 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-213ENST00000471978 CSTBP04080 98 aaKnown RBP17.92■□□□□ 0.46
C9orf3-213ENST00000471978 IGLL1P15814 213 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 NHLRC3Q5JS37 347 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 SLC16A12Q6ZSM3 486 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 DRAM1Q8N682 238 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 OR10A7Q8NGE5 316 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 SMIM19Q96E16 107 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 S100A13Q99584 98 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 IFT22Q9H7X7 185 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 IL36GQ9NZH8 169 aa17.92■□□□□ 0.46
C9orf3-213ENST00000471978 EBAG9O00559 213 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 OGG1O15527 345 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 CLIC3O95833 236 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 PF4P02776 101 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 MYL12AP19105 171 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 BDKRB2P30411 391 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 RBM11P57052 281 aaKnown RBP17.91■□□□□ 0.46
C9orf3-213ENST00000471978 DIAPH2-AS1Q14236 149 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 HES1Q14469 280 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 KHDC1LQ5JSQ8 128 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 OR10X1Q8NGY0 326 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 OR52N1Q8NH53 320 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 ORAI1Q96D31 301 aa17.91■□□□□ 0.46
C9orf3-213ENST00000471978 AURKAIP1Q9NWT8 199 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-213ENST00000471978 DIMT1Q9UNQ2 313 aaKnown RBP17.91■□□□□ 0.46
C9orf3-213ENST00000471978 EXOSC1Q9Y3B2 195 aaKnown RBP17.91■□□□□ 0.46
C9orf3-213ENST00000471978 A0A1W2PPI3 338 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 GEMIN2O14893 280 aaKnown RBP17.9■□□□□ 0.46
C9orf3-213ENST00000471978 SERPINA2P20848 420 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 RAB7AP51149 207 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 LOXL3P58215 753 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 FOXB2Q5VYV0 432 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 OR13C5Q8NGS8 318 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 GHSRQ92847 366 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 PAK1IP1Q9NWT1 392 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-213ENST00000471978 CLEC2DQ9UHP7 191 aa17.9■□□□□ 0.46
C9orf3-213ENST00000471978 A0A1W2PPE3 182 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 TMEM30CPA0ZSE6 113 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 LALBAP00709 142 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 TMEM11P17152 192 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 GZMHP20718 246 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 RIPK1Q13546 671 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 HNF4GQ14541 408 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 LINC00596Q86U02 117 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 OR8H3Q8N146 312 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 CYGBQ8WWM9 190 aa17.89■□□□□ 0.45
C9orf3-213ENST00000471978 PSMB11A5LHX3 300 aa17.88■□□□□ 0.45
C9orf3-213ENST00000471978 ZNF780AO75290 641 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms