RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 OR2M4Q96R27 311 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 METTL26Q96S19 204 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 C12orf57Q99622 126 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 RNF126Q9BV68 326 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 RIOK2Q9BVS4 552 aaKnown RBP3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 MS4A8Q9BY19 250 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 SHPKQ9UHJ6 478 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 PRO0461Q9UI25 63 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 RTL9Q8NET4 1388 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 IGLV1-36A0A0B4J1U3 117 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PQLC2LA1A4F0 135 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 I3L4J1 428 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 K7EP13 123 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 ORC5O43913 435 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 YIF1AO95070 293 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PDYNP01213 254 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 SPNP16150 400 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 TCN2P20062 427 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 VDAC1P21796 283 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 RUNX1Q01196 453 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 EMX1Q04741 257 aaPredicted RBP3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PMVKQ15126 192 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 TMEM255AQ5JRV8 349 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 RSBN1Q5VWQ0 802 aaPredicted RBP3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 ELP2Q6IA86 826 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 C11orf71Q6IPW1 123 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 UFSP1Q6NVU6 142 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 DGAT2L6Q6ZPD8 337 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 NEGR1Q7Z3B1 354 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 C9orf40Q8IXQ3 194 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 C6orf223Q8N319 242 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 OR2K2Q8NGT1 345 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 OR2A12Q8NGT7 310 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 OR10D3Q8NH80 312 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 DNAJC9Q8WXX5 260 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 MRPL48Q96GC5 212 aaKnown RBP3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PYURFQ96I23 114 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 FOPNLQ96NB1 174 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 HIST1H4GQ99525 98 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 VPS25Q9BRG1 176 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 RTBDNQ9BSG5 229 aaPredicted RBP3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 C20orf85Q9H1P6 137 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 ISG20L2Q9H9L3 353 aaKnown RBP3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 TPT1P8Q9HAU6 139 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 LRTM1Q9HBL6 345 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 CISHQ9NSE2 258 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 RASL12Q9NYN1 266 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PYCARDQ9ULZ3 195 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PKIGQ9Y2B9 76 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 DENND4AQ7Z401 1863 aa3.39□□□□□ -1.87
PRPF40A-206ENST00000471167 PALLDQ8WX93 1383 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 PHF3Q92576 2039 aaKnown RBP3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TRAV8-2A0A0B4J237 113 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TEX50A0A1B0GTY4 177 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 MAP1LC3B2A6NCE7 125 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TMX2-CTNND1H3BSU7 103 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 H7C417 338 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 K7EQS6 105 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 MFSD11O43934 449 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 NPIPB7O75200 414 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 BPGMP07738 259 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 OR5G3P0C626 314 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 CXCL2P19875 107 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 MIPP30301 263 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 AGTR1P30556 359 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 SDC4P31431 198 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 CA5AP35218 305 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 CTRLP40313 264 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 LGALS7P47929 136 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 CKS1BP61024 79 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 CD47Q08722 323 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 QPRTQ15274 297 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TMEM78Q5T7P6 136 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 N4BP2L1Q5TBK1 243 aaPredicted RBP3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 ANKRD22Q5VYY1 191 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 STEAP4Q687X5 459 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 DCUN1D2Q6PH85 259 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TBPL2Q6SJ96 375 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TOMM20LQ6UXN7 152 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 C6orf120Q7Z4R8 191 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 TGIF2LYQ8IUE0 185 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 C1orf158Q8N1D5 194 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 MUC15Q8N387 334 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 SLC35G3Q8N808 338 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 OR51A2Q8NGJ7 313 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 OR5J2Q8NH18 312 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 RGP1Q92546 391 aaPredicted RBP3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 BORCS7Q96B45 105 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 FMC1Q96HJ9 113 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 LINC00477Q96M19 166 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 GPER1Q99527 375 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 CCDC32Q9BV29 185 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 RSPO3Q9BXY4 272 aaPredicted RBP3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 MAP1LC3BQ9GZQ8 125 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 FAM96AQ9H5X1 160 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 MTFP1Q9UDX5 166 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF223Q9UK11 482 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms