RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 FAM185AQ8N0U4 392 aa11.74□□□□□ -0.53
CCNL1-212ENST00000470121 CCDC71LQ8N9Z2 235 aa11.74□□□□□ -0.53
CCNL1-212ENST00000470121 INO80EQ8NBZ0 244 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-212ENST00000470121 ST8SIA2Q92186 375 aa11.74□□□□□ -0.53
CCNL1-212ENST00000470121 ZNF835Q9Y2P0 537 aa11.74□□□□□ -0.53
CCNL1-212ENST00000470121 BSNQ9UPA5 3926 aa11.74□□□□□ -0.53
CCNL1-212ENST00000470121 IGKV1D-13A0A0B4J2D9 117 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 KANTRA0A1W2PQU2 76 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 H7C1Q1 480 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 SIRPB1O00241 398 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 IGKV1-13P0DP09 117 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 ZNF250P15622 560 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 NKX6-1P78426 367 aaPredicted RBP11.73□□□□□ -0.53
CCNL1-212ENST00000470121 IAH1Q2TAA2 248 aaPredicted RBP11.73□□□□□ -0.53
CCNL1-212ENST00000470121 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 DCUN1D4Q92564 292 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 CITED4Q96RK1 184 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 DMRTA2Q96SC8 542 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 MSL2Q9HCI7 577 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
CCNL1-212ENST00000470121 WIPI2Q9Y4P8 454 aa11.73□□□□□ -0.53
CCNL1-212ENST00000470121 APC2O95996 2303 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 NPIPB11E5RHQ5 1161 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 M0R1B8 84 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 PTBP3O95758 552 aaKnown RBP11.72□□□□□ -0.53
CCNL1-212ENST00000470121 HAND1O96004 215 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 IFNA21P01568 189 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 RLN2P04090 185 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 NMBP08949 121 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 FAM27E3Q08E93 113 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 PRAMEF6Q5VXH4 476 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 RGS7BPQ6MZT1 257 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-212ENST00000470121 ZNF818PQ6ZRF7 136 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 LRP11Q86VZ4 500 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-212ENST00000470121 LHFPL5Q8TAF8 219 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 CNTNAP3BQ96NU0 1288 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 TP53RKQ96S44 253 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 CNTNAP3Q9BZ76 1288 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 PIGMQ9H3S5 423 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 GSKIPQ9P0R6 139 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 MEMO1Q9Y316 297 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 A0A0G2JNJ9 132 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 GPR31O00270 319 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 PRRG2O14669 202 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 WNT9BO14905 357 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 SPDEFO95238 335 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 RRASP10301 218 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 GLRXP35754 106 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 ACP7Q6ZNF0 438 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 LYZL2Q7Z4W2 148 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 LGI3Q8N145 548 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 OR1S1Q8NH92 325 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 PRR7Q8TB68 274 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 MUCL1Q96DR8 90 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 AQP10Q96PS8 301 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 Q9UFV3 132 aa11.72□□□□□ -0.53
CCNL1-212ENST00000470121 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 MSGN1A6NI15 193 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 PHF1O43189 567 aaPredicted RBP11.71□□□□□ -0.53
CCNL1-212ENST00000470121 PSPNO60542 156 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 IGHV3-13P01766 116 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 CD200P41217 278 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 TBC1D26Q86UD7 250 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 SECTM1Q8WVN6 248 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 ARPC5LQ9BPX5 153 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 SLC5A7Q9GZV3 580 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 MED9Q9NWA0 146 aa11.71□□□□□ -0.53
CCNL1-212ENST00000470121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 CEBPDP49716 269 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 LUMP51884 338 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 HOXA4Q00056 320 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 HMGN3Q15651 99 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 MRGPRGQ86SM5 289 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 ZNF565Q8N9K5 539 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 TMEM56Q96MV1 263 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 OR2W1Q9Y3N9 320 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 SPEF1Q9Y4P9 236 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 BOD1L1Q8NFC6 3051 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 ANKRD11Q6UB99 2663 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-212ENST00000470121 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 TRAV39A0A0B4J263 110 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 CRYAAP02489 173 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 PET100P0DJ07 73 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 BMP5P22003 454 aa11.7□□□□□ -0.54
CCNL1-212ENST00000470121 MZT1Q08AG7 82 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms