RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SELEP16581 610 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 TNFRSF4P43489 277 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 POLR2HP52434 150 aaKnown RBP6.89□□□□□ -1.31
TPM3-215ENST00000469717 MLF1P58340 268 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 GNMTQ14749 295 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 HERPUD1Q15011 391 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 DMRTA1Q5VZB9 504 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 SLC38A9Q8NBW4 561 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 OR5T1Q8NG75 326 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 OR10A7Q8NGE5 316 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 RCC1LQ96I51 464 aaKnown RBP6.89□□□□□ -1.31
TPM3-215ENST00000469717 NOL4LQ96MY1 436 aaPredicted RBP6.89□□□□□ -1.31
TPM3-215ENST00000469717 NUDT16L1Q9BRJ7 211 aaKnown RBP6.89□□□□□ -1.31
TPM3-215ENST00000469717 PCGF1Q9BSM1 259 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 MYO18BQ8IUG5 2567 aa6.89□□□□□ -1.31
TPM3-215ENST00000469717 A0A1W2PPQ1 181 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 NUPR1O60356 82 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 ABLIM2Q6H8Q1 611 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 FAM185AQ8N0U4 392 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 OR4D5Q8NGN0 318 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 ACTR3CQ9C0K3 210 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 GOLT1BQ9Y3E0 138 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 SPTBN4Q9H254 2564 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 FER1L5A0AVI2 2057 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 LOC102723971A0A1B0GUV8 181 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 B4E171 279 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 FGF5P12034 268 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 IL13RA2Q14627 380 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 PIGYQ3MUY2 71 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 SP5Q6BEB4 398 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 D2HGDHQ8N465 521 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 SSC4DQ8WTU2 575 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 GPR173Q9NS66 373 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 POLR3KQ9Y2Y1 108 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 THADAQ6YHU6 1953 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 A0A1W2PNR3 127 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 PATE3B3GLJ2 98 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 DLEU1O43261 78 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 DFFBO76075 338 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 CYB5R3P00387 301 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 IDH3GP51553 393 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 RND2P52198 227 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 TMEM267Q0VDI3 215 aaPredicted RBP6.88□□□□□ -1.31
TPM3-215ENST00000469717 RAB35Q15286 201 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 ZNF726P1Q15940 193 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 C16orf82Q7Z2V1 217 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 IL22RA1Q8N6P7 574 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 ADGRG7Q96K78 797 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 ARRDC1-AS1Q9H2J1 176 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 RPRMQ9NS64 109 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 PTPRSQ13332 1948 aa6.88□□□□□ -1.31
TPM3-215ENST00000469717 CEBPZOSA8MTT3 80 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 ZNHIT1O43257 154 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 ADAM20O43506 726 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 DDAH2O95865 285 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 POU2F2P09086 479 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 IRF2P14316 349 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 SLC6A8P48029 635 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 H3F3AP84243 136 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 RIPPLY2Q5TAB7 128 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 TMEM256Q8N2U0 113 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 OR2AE1Q8NHA4 323 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
TPM3-215ENST00000469717 SERPINE3A8MV23 424 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 M0R143 59 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 EFNA2O43921 213 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 OR2J2O76002 312 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 IGHMP01871 453 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 CEACAM1P13688 526 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 SPINK2P20155 84 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 AADACP22760 399 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 GFERP55789 205 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 DCAF7P61962 342 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 ZNF266Q14584 549 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 KIAA0895LQ68EN5 471 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 DNM1P34Q6PK57 102 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 GRINAQ7Z429 371 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 ZNF721Q8TF20 911 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 DNASE2BQ8WZ79 361 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 C11orf1Q9H5F2 150 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 SDF2L1Q9HCN8 221 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 PNRC2Q9NPJ4 139 aaKnown RBP6.87□□□□□ -1.31
TPM3-215ENST00000469717 SERINC1Q9NRX5 453 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 OBP2AQ9NY56 170 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 B3GAT1Q9P2W7 334 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 ALG1L2C9J202 215 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 H3BMH7 237 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 DEFA4P12838 97 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 BMP5P22003 454 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 FAM189A2Q15884 450 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 DNLZQ5SXM8 178 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 H1FNTQ75WM6 255 aaPredicted RBP6.87□□□□□ -1.31
TPM3-215ENST00000469717 UEVLDQ8IX04 471 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 SLC22A18ASQ8N1D0 253 aa6.87□□□□□ -1.31
TPM3-215ENST00000469717 RNASEH2CQ8TDP1 164 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms