RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 UBDO15205 165 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 IDH3BO43837 385 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 MPZL2O60487 215 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 NXPH2O95156 264 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 IGLV1-47P01700 117 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 IGLV1-51P01701 117 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 PIPP12273 146 aaPredicted RBP3.55□□□□□ -1.84
VPS8-219ENST00000469479 ATP6V1B1P15313 513 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 TMEM11P17152 192 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 CD24P25063 80 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 PSMB8P28062 276 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 HSD11B1P28845 292 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 CD34P28906 385 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 RAB7AP51149 207 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 EDDM3BP56851 147 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 PRDX4Q13162 271 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 ALKBH1Q13686 389 aaKnown RBP3.55□□□□□ -1.84
VPS8-219ENST00000469479 HES1Q14469 280 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 TRAM2Q15035 370 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 MEP1BQ16820 701 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 CEACAM21Q3KPI0 293 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 LCN12Q6JVE5 192 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 HEPN1Q6WQI6 88 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 ZNF730Q6ZMV8 503 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 ZNF573Q86YE8 665 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 LINC00346Q8IVM7 164 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 MSRB3Q8IXL7 192 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 NRMQ8IXM6 262 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 OFCC1Q8IZS5 231 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 OR8H3Q8N146 312 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 FAM86B1Q8N7N1 296 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 OR4D11Q8NGI4 311 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 OR5A2Q8NGI9 324 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 OR13C2Q8NGS9 318 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 AQP3Q92482 292 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 DCUN1D4Q92564 292 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 TOMM40LQ969M1 308 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 RPEQ96AT9 228 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 TAMM41Q96BW9 452 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 OR8B4Q96RC9 309 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 NR1H4Q96RI1 486 aaPredicted RBP3.55□□□□□ -1.84
VPS8-219ENST00000469479 TXLNGYQ9BZA5 131 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 NSRP1Q9H0G5 558 aaKnown RBP3.55□□□□□ -1.84
VPS8-219ENST00000469479 OR51I2Q9H344 312 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 ANKRD19PQ9H560 264 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 NIPAL2Q9H841 368 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 SEBOXQ9HB31 216 aaPredicted RBP3.55□□□□□ -1.84
VPS8-219ENST00000469479 B9D1Q9UPM9 204 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 SIGLEC7Q9Y286 467 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 RHBDD3Q9Y3P4 386 aa3.55□□□□□ -1.84
VPS8-219ENST00000469479 PKHD1P08F94 4074 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SRRM2Q9UQ35 2752 aaKnown RBP3.54□□□□□ -1.84
VPS8-219ENST00000469479 TRGV10A0A0A0MS01 117 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 ZNF850A8MQ14 1090 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 TEX22C9J3V5 150 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 PTGES3LE9PB15 166 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 LINC01619G3V211 115 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 J3QT63 122 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 ARPC3O15145 178 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 DEDDO75618 318 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 TFF1P04155 84 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 IGF1P05019 195 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SPARCP09486 303 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 FASP25445 335 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 GPR4P46093 362 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 OR1E2P47887 323 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 CX3CR1P49238 355 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 GPM6AP51674 278 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 PRKXP51817 358 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 BLVRAP53004 296 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 STX3Q13277 289 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 MADCAM1Q13477 382 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 HLA-DRB5Q30154 266 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SLX4IPQ5VYV7 408 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 MBOAT2Q6ZWT7 520 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 KRT74Q7RTS7 529 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 TRAPPC6BQ86SZ2 158 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 LAX1Q8IWV1 398 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 MICU2Q8IYU8 434 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 Q8N402 240 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 CD177Q8N6Q3 437 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 FAM81AQ8TBF8 368 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 UBLCP1Q8WVY7 318 aaPredicted RBP3.54□□□□□ -1.84
VPS8-219ENST00000469479 HPSE2Q8WWQ2 592 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS8-219ENST00000469479 FLYWCH2Q96CP2 140 aaKnown RBP3.54□□□□□ -1.84
VPS8-219ENST00000469479 SLAMF6Q96DU3 332 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SPDL1Q96EA4 605 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SORT1Q99523 831 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SH3GL1Q99961 368 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 TMED9Q9BVK6 235 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 FNDC11Q9BVV2 318 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 DCAF13Q9NV06 445 aaKnown RBP3.54□□□□□ -1.84
VPS8-219ENST00000469479 TAS2R3Q9NYW6 316 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 VAPAQ9P0L0 249 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 LGALS13Q9UHV8 139 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 COPS3Q9UNS2 423 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 SLC22A13Q9Y226 551 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 WSB1Q9Y6I7 421 aa3.54□□□□□ -1.84
VPS8-219ENST00000469479 HERC1Q15751 4861 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms