RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 RAB5CP51148 216 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 MPV17LQ2QL34 196 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 VASH2Q86V25 355 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 RDH5Q92781 318 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 WSB1Q9Y6I7 421 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 A0A1W2PR80 420 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 PINLYPA6NC86 204 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 ZNF503-AS2A6NEH8 195 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 SYNGR1O43759 233 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 LILRA1O75019 489 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 SCAF4O95104 1147 aaKnown RBP10.36□□□□□ -0.75
VARS2-205ENST00000469358 HIKESHIQ53FT3 197 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 LCN15Q6UWW0 184 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 LYRM2Q9NU23 88 aaPredicted RBP10.36□□□□□ -0.75
VARS2-205ENST00000469358 TOX3O15405 576 aaPredicted RBP10.36□□□□□ -0.75
VARS2-205ENST00000469358 NGFP01138 241 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 CST2P09228 141 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 RAC3P60763 192 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 RPL23AP62750 156 aaKnown RBP10.36□□□□□ -0.75
VARS2-205ENST00000469358 EIF3IQ13347 325 aaKnown RBP10.36□□□□□ -0.75
VARS2-205ENST00000469358 ZNF266Q14584 549 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 OR2B11Q5JQS5 317 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 IL1F10Q8WWZ1 152 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 RHOVQ96L33 236 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 SSX3Q99909 188 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 GPR61Q9BZJ8 451 aa10.36□□□□□ -0.75
VARS2-205ENST00000469358 A0A087WZY1 265 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 PITX3O75364 302 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 TK1P04183 234 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 IAPPP10997 89 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 OTX2P32243 289 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 PAX9P55771 341 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 Q6ZRM9 215 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 SSX7Q7RTT5 188 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 CMTM1Q8IZ96 169 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 IL22RA1Q8N6P7 574 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 PRRG4Q9BZD6 226 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 GPR35Q9HC97 309 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 DEPPQ9NTK1 212 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 MTCH1Q9NZJ7 389 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 TAAR3PQ9P1P4 343 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 ZDBF2Q9HCK1 2354 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 ZNF816-ZNF321PA0A0X1KG74 233 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 CBR3O75828 277 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 RAB11AP62491 216 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 AKR1C8PQ5T2L2 129 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 SAP25Q8TEE9 199 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 TMPRSS5Q9H3S3 457 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 ZNF665Q9H7R5 613 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 C5orf49A4QMS7 147 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BKO60814 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BJP06899 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BOP23527 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 S100PP25815 95 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BBP33778 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 PMELP40967 661 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 UCP3P55916 312 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BDP58876 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 RAB2AP61019 212 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BCP62807 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 PRDX4Q13162 271 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST2H2BEQ16778 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.35□□□□□ -0.75
VARS2-205ENST00000469358 TMEM211Q6ICI0 200 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 SLC25A24Q6NUK1 477 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 ZNF295-AS1Q8N0V1 137 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 ZNF383Q8NA42 475 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 OR1K1Q8NGR3 316 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 IFI44Q8TCB0 444 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BHQ93079 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BNQ99877 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 HIST1H2BMQ99879 126 aa10.35□□□□□ -0.75
VARS2-205ENST00000469358 RPL36A-HNRNPH2H7BZ11 118 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
VARS2-205ENST00000469358 CDS2O95674 445 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 CFIP05156 583 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 KLK3P07288 261 aaPredicted RBP10.34□□□□□ -0.75
VARS2-205ENST00000469358 SOD3P08294 240 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 Q0VFX4 171 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 CLEC12BQ2HXU8 276 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 ZNF552Q9H707 407 aaPredicted RBP10.34□□□□□ -0.75
VARS2-205ENST00000469358 Q9N2K0 584 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 CHD3Q12873 2000 aaKnown RBP10.34□□□□□ -0.75
VARS2-205ENST00000469358 ZNF732B4DXR9 585 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 K7ESF4 209 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 HOXA5P20719 270 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 FKBP2P26885 142 aaKnown RBP10.34□□□□□ -0.75
VARS2-205ENST00000469358 STARD6P59095 220 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 OR8B8Q15620 311 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 CLDND2Q8NHS1 167 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 CPT1CQ8TCG5 803 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 MALSU1Q96EH3 234 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 TMEM56Q96MV1 263 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 FAM86C1Q9NVL1 165 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms