RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CPEB2Q7Z5Q1 589 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 LRP11Q86VZ4 500 aa7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 METTL27Q8N6F8 245 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 OR51E1Q8TCB6 317 aa7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 MRPL30Q8TCC3 161 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 CCDC74BQ96LY2 380 aa7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 TUBG2Q9NRH3 451 aa7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 PLEKHJ1Q9NW61 149 aa7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 RBM7Q9Y580 266 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-207ENST00000469334 KIAA2026Q5HYC2 2103 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 BLACEA4D250 179 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 MLNRO43193 412 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 TOX4O94842 621 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 NRASP01111 189 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 KRASP01116 189 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 REG1AP05451 166 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 CYBAP13498 195 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 CLDN18P56856 261 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 HERV-K104P61576 105 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 MESP2Q0VG99 397 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 RTP5Q14D33 572 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 LY6G5CQ5SRR4 150 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 TSPO2Q5TGU0 170 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 FAM78BQ5VT40 261 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 UNQ5815/PRO19632Q6UWF5 114 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 RNF144BQ7Z419 303 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 ZNF695Q8IW36 515 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 TMEM217Q8N7C4 229 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 C12orf76Q8N812 135 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 RERGQ96A58 199 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 STARD4Q96DR4 205 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 OR10A5Q9H207 317 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 LIME1Q9H400 295 aa7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 NXT1Q9UKK6 140 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-207ENST00000469334 IGHV2-26A0A0B4J1V2 119 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 OR5B21A6NL26 309 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 METTL12A8MUP2 240 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 M0QZ24 198 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SOX1O00570 391 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 PLPP3O14495 311 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 MPPED1O15442 326 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SERF1AO75920 110 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 JMJD7P0C870 316 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 CTSEP14091 401 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 HOXB2P14652 356 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 CRISP2P16562 243 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 DAP3P51398 398 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 FKBP1BP68106 108 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 FMODQ06828 376 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ELAVL3Q14576 367 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 LDLRAD2Q5SZI1 272 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 PLPP4Q5VZY2 271 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 VHLLQ6RSH7 139 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 PET117Q6UWS5 81 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 MEX3BQ6ZN04 569 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ABHD12BQ7Z5M8 362 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 MCEMP1Q8IX19 187 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SIGLECL1Q8N7X8 197 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 Q8N976 141 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 GATSQ8NAP1 163 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SIGLEC12Q96PQ1 595 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SLC46A2Q9BY10 475 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SAMD10Q9BYL1 202 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ZDHHC11Q9H8X9 412 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 PHPT1Q9NRX4 125 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 TIMM9Q9Y5J7 89 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ADAMTS9Q9P2N4 1935 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SAA2-SAA4A0A096LPE2 208 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ZNF814B7Z6K7 855 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 MSR1P21757 451 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 TSPOP30536 169 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 LHX2P50458 406 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 FGF8P55075 233 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 LINC00310P59036 64 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 FXYD4P59646 89 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 OR8B8Q15620 311 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 KISS1Q15726 138 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 NMSQ5H8A3 153 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 TCF24Q7RTU0 167 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 LHFPL4Q7Z7J7 247 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 MYPOPQ86VE0 399 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 COMMD2Q86X83 199 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SUMF1Q8NBK3 374 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ASB10Q8WXI3 467 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 LHX4Q969G2 390 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 NEIL1Q96FI4 390 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 Q96M66 194 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 RAB40CQ96S21 281 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ZFYVE21Q9BQ24 234 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SGIP1Q9BQI5 828 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 APOOQ9BUR5 198 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 HDAC8Q9BY41 377 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 ELOVL5Q9NYP7 299 aa7.79□□□□□ -1.16
SMARCE1-207ENST00000469334 TP53TG3Q9ULZ0 132 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms