RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 LAX1Q8IWV1 398 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 GAPTQ8N292 157 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 ZMAT3Q9HA38 289 aaKnown RBP12.55□□□□□ -0.4
SNIP1-202ENST00000468040 C12orf4Q9NQ89 552 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 MMP26Q9NRE1 261 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 AK3Q9UIJ7 227 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 KCNK7Q9Y2U2 307 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 hCG_1809904A0A1W2PP81 198 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 A0A1W2PPE2 198 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 A0A1W2PR64 198 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 A0A1W2PRV1 198 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 J3QLI3 93 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 CD3GP09693 182 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 S100A5P33763 92 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 MNDAP41218 407 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 PITPNAQ00169 270 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 ARFRP1Q13795 201 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 CDNFQ49AH0 187 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 HACD4Q5VWC8 232 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 RTN4RL2Q86UN3 420 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 DYRK2Q92630 601 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 CORO2AQ92828 525 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 ZNF714Q96N38 554 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
SNIP1-202ENST00000468040 MIXL1Q9H2W2 232 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 GAL3ST2Q9H3Q3 398 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-202ENST00000468040 EXTL2Q9UBQ6 330 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 TRAPPC2LQ9UL33 140 aa12.54□□□□□ -0.4
SNIP1-202ENST00000468040 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TEX15Q9BXT5 2789 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TMEM235A6NFC5 223 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 M0R1W7 72 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 CLPXO76031 633 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TPPPO94811 219 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 NAPSAO96009 420 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 GLP1RP43220 463 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TAS2R20P59543 309 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 GNG2P59768 71 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 ZNF273Q14593 569 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 CR1LQ2VPA4 569 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 CNPY1Q3B7I2 92 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 METTL11BQ5VVY1 283 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 OLFML2AQ68BL7 652 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 MOB1BQ7L9L4 216 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TCF23Q7RTU1 214 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 MRPL30Q8TCC3 161 aaKnown RBP12.53□□□□□ -0.4
SNIP1-202ENST00000468040 WDFY2Q96P53 400 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 ONECUT1Q9UBC0 465 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 KPTNQ9Y664 436 aa12.53□□□□□ -0.4
SNIP1-202ENST00000468040 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-202ENST00000468040 RBP4P02753 201 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 MELTFP08582 738 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 GZMHP20718 246 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 PAX8Q06710 450 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 FAHD2BQ6P2I3 314 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-202ENST00000468040 CNIH2Q6PI25 160 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 BAIAP2L2Q6UXY1 529 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 C1orf122Q6ZSJ8 110 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 ZNF554Q86TJ5 538 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 OR4K15Q8NH41 348 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 C15orf40Q8WUR7 153 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 CCDC107Q8WV48 283 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 FAHD2AQ96GK7 314 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 CYYR1Q96J86 154 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 RAB9BQ9NP90 201 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 MBNL3Q9NUK0 354 aaKnown RBP12.52□□□□□ -0.41
SNIP1-202ENST00000468040 RABL2AQ9UBK7 228 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-202ENST00000468040 OPN4Q9UHM6 478 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 MGAT4AQ9UM21 535 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 RABL2BQ9UNT1 228 aa12.52□□□□□ -0.41
SNIP1-202ENST00000468040 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.41
SNIP1-202ENST00000468040 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-202ENST00000468040 VPS13CQ709C8 3753 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 CCL3L1P16619 93 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 ARF6P62330 175 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 OR13A1Q8NGR1 328 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 SETD6Q8TBK2 473 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 HDHD3Q9BSH5 251 aaPredicted RBP12.51□□□□□ -0.41
SNIP1-202ENST00000468040 C7orf69Q9H7B7 122 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
SNIP1-202ENST00000468040 PTTG2Q9NZH5 202 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 MRPS7Q9Y2R9 242 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms