RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 NAPSAO96009 420 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 TK1P04183 234 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 ASCL1P50553 236 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 C1orf189Q5VU69 101 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 CYP2G1PQ6ZSU1 146 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 SF3B5Q9BWJ5 86 aaKnown RBP13.4□□□□□ -0.26
CHD1L-205ENST00000467213 Q9N2K0 584 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 NAT8Q9UHE5 227 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 LRP5LA4QPB2 252 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 METTL12A8MUP2 240 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 CHST1O43916 411 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 HYAL1Q12794 435 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 FGF21Q9NSA1 209 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 CD207Q9UJ71 328 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 RFNGQ9Y644 331 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 AMBPP02760 352 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 PGA5P0DJD9 388 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 RAB11AP62491 216 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 CHAF1BQ13112 559 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 PIGYQ3MUY2 71 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 WDR25Q64LD2 544 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF787Q6DD87 383 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 OR10G3Q8NGC4 313 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 SPACA9Q96E40 222 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-205ENST00000467213 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 KIAA1549Q9HCM3 1950 aa13.39□□□□□ -0.27
CHD1L-205ENST00000467213 KIR2DS1A0A191URI9 304 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 KIAA1324LA8MWY0 1029 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-205ENST00000467213 NDUFB7P17568 137 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 KIR2DS4P43632 304 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 FIP1L1Q6UN15 594 aaKnown RBP13.38□□□□□ -0.27
CHD1L-205ENST00000467213 OR1F12Q8NHA8 337 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 TAAR3PQ9P1P4 343 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 TRBV6-6A0A0A6YYG2 114 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 hCG_38984A0A1B0GV85 526 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 TMEM250H0YL14 139 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 TYMSP04818 313 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 OMGP23515 440 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 CCKARP32238 428 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 LBX1P52954 281 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 FAM3BP58499 235 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-205ENST00000467213 DAZAP2Q15038 168 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-205ENST00000467213 DMRTC1Q5HYR2 192 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
CHD1L-205ENST00000467213 SPSB4Q96A44 273 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF581Q9P0T4 197 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
CHD1L-205ENST00000467213 CST7O76096 145 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 HOXA6P31267 233 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 OR1D5P58170 312 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
CHD1L-205ENST00000467213 RUNX1Q01196 453 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF385CQ66K41 422 aaPredicted RBP13.37□□□□□ -0.27
CHD1L-205ENST00000467213 TRANK1O15050 2925 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 PPP5D1E7EU14 171 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 TP53I11O14683 189 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 S100GP29377 79 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 CEBPGP53567 150 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF92Q03936 586 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF154Q13106 437 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF818PQ6ZRF7 136 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 CPEB2Q7Z5Q1 589 aaKnown RBP13.37□□□□□ -0.27
CHD1L-205ENST00000467213 DMRTC2Q8IXT2 367 aaPredicted RBP13.37□□□□□ -0.27
CHD1L-205ENST00000467213 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 MISP3Q96FF7 219 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 BTF3L4Q96K17 158 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 REPIN1Q9BWE0 567 aaKnown RBP13.37□□□□□ -0.27
CHD1L-205ENST00000467213 RPRMQ9NS64 109 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 SLC22A20A6NK97 555 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
CHD1L-205ENST00000467213 DEFB133Q30KQ1 61 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 C7orf61Q8IZ16 206 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF664Q8N3J9 261 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 SCGB1C1Q8TD33 95 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 ULBP2Q9BZM5 246 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
CHD1L-205ENST00000467213 TNRC6BQ9UPQ9 1833 aaKnown RBP13.36□□□□□ -0.27
CHD1L-205ENST00000467213 SEC16AO15027 2179 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF816-ZNF321PA0A0X1KG74 233 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 GLB1P16278 677 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 SLC10A1Q14973 349 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 LRRC75BQ2VPJ9 315 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 ACOT6Q3I5F7 207 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-205ENST00000467213 TMEM41BQ5BJD5 291 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 THNSL2Q86YJ6 484 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 CPT1CQ8TCG5 803 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 ANAPC16Q96DE5 110 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 SNX22Q96L94 193 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 MRPL37Q9BZE1 423 aaKnown RBP13.36□□□□□ -0.27
CHD1L-205ENST00000467213 ZNF442Q9H7R0 627 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
CHD1L-205ENST00000467213 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms