RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	LINC00032	P0C843	101 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	CFHR2	P36980	270 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	ARHGDIB	P52566	201 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PLTP	P55058	493 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PKNOX1	P55347	436 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	LYZ	P61626	148 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	BST1	Q10588	318 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PMS2P3	Q13401	168 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	TMEM155	Q4W5P6	130 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PRAMEF5	Q5TYX0	476 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	GPR157	Q5UAW9	335 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PRAMEF6	Q5VXH4	476 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	AP1AR	Q63HQ0	302 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	ZFAND6	Q6FIF0	208 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	LRRN1	Q6UXK5	716 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	VRK2	Q86Y07	508 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	CADM2	Q8N3J6	435 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PNKD	Q8N490	385 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	ZNF283	Q8N7M2	679 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	CCNYL1	Q8N7R7	359 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	SLC25A40	Q8TBP6	338 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	SFXN5	Q8TD22	340 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	OR5P2	Q8WZ92	322 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	ROPN1L	Q96C74	230 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	TMEM246	Q9BRR3	403 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	C1orf50	Q9BV19	199 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	TM2D1	Q9BX74	207 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	GPR61	Q9BZJ8	451 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	OR2J1	Q9GZK6	312 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	SLC38A1	Q9H2H9	487 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	PPA2	Q9H2U2	334 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	NCOR1P1	Q9H4R4	102 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	IKZF5	Q9H5V7	419 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	TMEM165	Q9HC07	324 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	NUDT15	Q9NV35	164 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	C1orf109	Q9NX04	203 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	IMPAD1	Q9NX62	359 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	TMCO1	Q9UM00	188 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	SAMD4A	Q9UPU9	718 aa	Known RBP	3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	SLC35A3	Q9Y2D2	325 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.85	□□□□□ -1.79
RBM17-208	ENST00000467080		U3KQK5	164 aa		3.85	□□□□□ -1.79
RBM17-208	ENST00000467080	IGKV1D-42	A0A075B6H8	117 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080		H3BMQ9	156 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	SLC17A2	O00624	439 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	LSM1	O15116	133 aa	Known RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	EIF3H	O15372	352 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	UBL3	O95164	117 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	TFPT	P0C1Z6	253 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ZNF43	P17038	809 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	CCNO	P22674	350 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	CXCR1	P25024	350 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	GCA	P28676	217 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	GRPR	P30550	384 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	RPL13A	P40429	203 aa	Known RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	PMEL	P40967	661 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ELF3	P78545	371 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	TNFAIP6	P98066	277 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	KLRD1	Q13241	179 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	NAB1	Q13506	487 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	TP53I3	Q53FA7	332 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	C6orf226	Q5I0X4	101 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	MRPL2	Q5T653	305 aa	Known RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ZNF57	Q68EA5	555 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	KRTAP5-4	Q6L8H1	288 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ZNF836	Q6ZNA1	936 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ZCCHC23	Q6ZST2	131 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	COMTD1	Q86VU5	262 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	TPRA1	Q86W33	373 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	EGFL6	Q8IUX8	553 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	SPIC	Q8N5J4	248 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ADAMTS16	Q8TE57	1224 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	DCAKD	Q8WVC6	231 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	C10orf82	Q8WW14	230 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	C17orf50	Q8WW18	174 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	C11orf40	Q8WZ69	217 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	L3HYPDH	Q96EM0	354 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	OXGR1	Q96P68	337 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	SLC35A5	Q9BS91	424 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	CHRDL1	Q9BU40	450 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	TAPBPL	Q9BX59	468 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	YTHDF1	Q9BYJ9	559 aa	Known RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ULBP2	Q9BZM5	246 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	RRAGD	Q9NQL2	400 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	POFUT2	Q9Y2G5	429 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	STK38L	Q9Y2H1	464 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	IFT52	Q9Y366	437 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	CAB39	Q9Y376	341 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	TMED5	Q9Y3A6	229 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	ABCA13	Q86UQ4	5058 aa		3.84	□□□□□ -1.79
RBM17-208	ENST00000467080	IGHV1-69D	A0A0B4J2H0	117 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080		A0A1B0GW55	424 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	FAM220BP	B1ANY3	271 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	HMGN4	O00479	90 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	RS1	O15537	224 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	WBP4	O75554	376 aa	Known RBP	3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	VAMP5	O95183	116 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	IGHV1-69	P01742	117 aa		3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	MMP7	P09237	267 aa	Predicted RBP	3.83	□□□□□ -1.8
RBM17-208	ENST00000467080	DUX4L2	P0CJ85	424 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms