RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 HCRTR1O43613 425 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 MPC2O95563 127 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 PLAUP00749 431 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 HLA-DQA2P01906 255 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SMIM17P0DL12 118 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SLC2A2P11168 524 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 RCC1P18754 421 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 CHATP28329 748 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 EMDP50402 254 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SMAGPQ0VAQ4 97 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 ZNF154Q13106 437 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 GPR50Q13585 617 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 ZNF284Q2VY69 593 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 ACOT6Q3I5F7 207 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SYTL3Q4VX76 610 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 AWAT1Q58HT5 328 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 HBMQ6B0K9 141 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FAM231DQ6ZW35 169 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 Q71RC1 249 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FAM57BQ71RH2 274 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SLC35E3Q7Z769 313 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FAM24BQ8N5W8 94 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 RELL2Q8NC24 303 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 MCFD2Q8NI22 146 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 CNIH3Q8TBE1 160 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 VN1R17PQ8TDU5 208 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 DOK4Q8TEW6 326 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 TMED6Q8WW62 240 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 NDRG1Q92597 394 aaKnown RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FGGYQ96C11 551 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 DDIT4LQ96D03 193 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SCMH1Q96GD3 660 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FRG2BQ96QU4 278 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 CLCC1Q96S66 551 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SORT1Q99523 831 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 MGLLQ99685 303 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 NIPSNAP3BQ9BS92 247 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 C20orf27Q9GZN8 174 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 CXXC4Q9H2H0 198 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 CWH43Q9H720 699 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 SCN3BQ9NY72 215 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FLRT3Q9NZU0 649 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 Q9UF83 564 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 ZNF780BQ9Y6R6 833 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 FOCADQ5VW36 1801 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 LOC285556D6RIA3 1793 aa4.73□□□□□ -1.65
LRCH3-212ENST00000466845 RBBP6Q7Z6E9 1792 aaKnown RBP4.73□□□□□ -1.65
LRCH3-212ENST00000466845 ZSWIM8A7E2V4 1837 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PTPRFP10586 1907 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 MYH1P12882 1939 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PLXND1Q9Y4D7 1925 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 TRAV38-1A0A0B4J264 116 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 LOC100130705A0A1B0GUX0 176 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 DAPL1A0PJW8 107 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 C15orf61A6NNL5 157 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 J3KT08 172 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 FABP7O15540 132 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 ZNF207O43670 478 aaKnown RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CRLF1O75462 422 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 TOXO94900 526 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 SERPINE1P05121 402 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 DBIP07108 87 aaKnown RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 ADRA2AP08913 450 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 RFPL3SP0C7P2 107 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CT45A6P0DMU7 189 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CT45A5P0DMU8 189 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CT45A7P0DMV0 189 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 HLA-EP13747 358 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CD59P13987 128 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 RPL7P18124 248 aaKnown RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 TCN2P20062 427 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 RPS3P23396 243 aaKnown RBP eCLIP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PRTN3P24158 256 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 SRIP30626 198 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 HRH1P35367 487 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 RPS4XP62701 263 aaKnown RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 IFITM3Q01628 133 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 KLF5Q13887 457 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 MEF2DQ14814 521 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PMVKQ15126 192 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 ZNF404Q494X3 552 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CT45A1Q5HYN5 189 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 KDM4DQ6B0I6 523 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 OR10K2Q6IF99 312 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 ALKAL1Q6UXT8 129 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 FAM183BPQ6ZVS7 135 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 GPD1LQ8N335 351 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 TCTEX1D1Q8N7M0 179 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 OR8G5Q8NG78 346 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 OR2G2Q8NGZ5 317 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CT45A3Q8NHU0 189 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PIFOQ8TCI5 191 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 RXFP4Q8TDU9 374 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 RASL10AQ92737 203 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 GPR146Q96CH1 333 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 DYNLL2Q96FJ2 89 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 GFM1Q96RP9 751 aaKnown RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CSF3RQ99062 836 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 MRPL57Q9BQC6 102 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms