RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ZFP3Q96NJ6 502 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ALKBH3Q96Q83 286 aaPredicted RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 CGREF1Q99674 301 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 MAP1LC3CQ9BXW4 147 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ACTR3CQ9C0K3 210 aaPredicted RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 ADGRL4Q9HBW9 690 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 BCL2L10Q9HD36 194 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 EXOSC3Q9NQT5 275 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 SAR1AQ9NR31 198 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 KLK11Q9UBX7 282 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SEC14L4Q9UDX3 406 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 KIF25Q9UIL4 384 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 MCTS1Q9ULC4 181 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 NDUFAF1Q9Y375 327 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SVEP1Q4LDE5 3571 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 FREM1Q5H8C1 2179 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CELSR1Q9NYQ6 3014 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 ANKRD17O75179 2603 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 TRBV7-9A0A0J9YWB2 115 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 A0A1B0GWA3 101 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 A0A1W2PR80 420 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 C5orf58C9J3I9 102 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 LRRN3E7EW58 273 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 SULT2B1O00204 365 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 FAAHO00519 579 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 HSD17B6O14756 317 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 MRASO14807 208 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 PPP1R2P9O14990 202 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 TNFSF12O43508 249 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 SHOX2O60902 331 aaPredicted RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 NPIPB7O75200 414 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR7A10O76100 309 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 THY1P04216 161 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 HTR2CP28335 458 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 UGT2B10P36537 528 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 VHLP40337 213 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 DAP3P51398 398 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 P2RY4P51582 365 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 POLR2HP52434 150 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 CTBP2P56545 445 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 RPL8P62917 257 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 H3F3AP84243 136 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 ST3GAL3Q11203 375 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR7A5Q15622 319 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 TAB1Q15750 504 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 CYP51A1Q16850 503 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 TRMT5Q32P41 509 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 METTL21CQ5VZV1 264 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 WDR25Q64LD2 544 aaPredicted RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 NANOGP8Q6NSW7 305 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 SLC35D2Q76EJ3 337 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 WDFY1Q8IWB7 410 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 CMTM1Q8IZ96 169 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 MS4A15Q8N5U1 240 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 ZIC4Q8N9L1 334 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR2T33Q8NG76 320 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 GPR32P1Q8NGA4 272 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR5T2Q8NGG2 359 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR6K3Q8NGY3 331 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR10A6Q8NH74 314 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 LYPD6BQ8NI32 183 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 GATAD1Q8WUU5 269 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 PCNPQ8WW12 178 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 CAPSLQ8WWF8 208 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 IL1F10Q8WWZ1 152 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 ACOT11Q8WXI4 607 aaPredicted RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 TMEM234Q8WY98 164 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 APH1AQ96BI3 265 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 TAMM41Q96BW9 452 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 RCN3Q96D15 328 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 ECSITQ9BQ95 431 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 FAM107BQ9H098 131 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 TMEM38AQ9H6F2 299 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 PLEKHF2Q9H8W4 249 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 NANOGQ9H9S0 305 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 BEX1Q9HBH7 125 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 FGF20Q9NP95 211 aaPredicted RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 MED4Q9NPJ6 270 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 OR2S2Q9NQN1 319 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 CMTM6Q9NX76 183 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 CALML5Q9NZT1 146 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 MRM2Q9UI43 246 aaKnown RBP3.27□□□□□ -1.89
UBR4-209ENST00000465036 KCNIP3Q9Y2W7 256 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 PUS1Q9Y606 427 aaKnown RBP eCLIP3.27□□□□□ -1.89
UBR4-209ENST00000465036 ROS1P08922 2347 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 HIVEP1P15822 2718 aa3.27□□□□□ -1.89
UBR4-209ENST00000465036 F8P00451 2351 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 MAP1AP78559 2803 aaPredicted RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 OR5B21A6NL26 309 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 CPSF4LA6NMK7 179 aaKnown RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 GJE1A6NN92 205 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 EVPLLA8MZ36 301 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 TRDCB7Z8K6 153 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 FTCDNL1E5RQL4 147 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 RNASEK-C17orf49H0YIS7 233 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 NME4O00746 187 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 GOSR2O14653 212 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 PHOX2AO14813 284 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms