RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 FRKP42685 505 aaPredicted RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 GUCA1AP43080 201 aaPredicted RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 FABP6P51161 128 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RPS20P60866 119 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 MRPS34P82930 218 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TGFBR3Q03167 851 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PNRC1Q12796 327 aaPredicted RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TESK1Q15569 626 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 HSPB2Q16082 182 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 Q499Y3 187 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM128Q5BJH2 165 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 FAM78BQ5VT40 261 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SPSB3Q6PJ21 355 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 LRRC70Q7Z2Q7 622 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 COMMD6Q7Z4G1 85 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 DEFB128Q7Z7B8 93 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 COMMD2Q86X83 199 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZDHHC22Q8N966 263 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SLC38A9Q8NBW4 561 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR52E1Q8NGJ3 308 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR52E2Q8NGJ4 325 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR51G1Q8NGK1 321 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PFN4Q8NHR9 129 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ADAMTS15Q8TE58 950 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 HARBI1Q96MB7 349 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 AP1S3Q96PC3 154 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 IMMP2LQ96T52 175 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SMIM7Q9BQ49 75 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RBM24Q9BX46 236 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR51I2Q9H344 312 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PLK3Q9H4B4 646 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SMDT1Q9H4I9 107 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SDF2L1Q9HCN8 221 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 A4GALTQ9NPC4 353 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CLEC4EQ9ULY5 219 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 XIRP2A4UGR9 3374 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TICRRQ7Z2Z1 1910 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 USP24Q9UPU5 2620 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 F5H5T6 163 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 M0R1X1 148 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RAMP2O60895 175 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 NPIPB7O75200 414 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 DEDDO75618 318 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SFT2D2O95562 160 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 HRASP01112 189 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 HNRNPA1P09651 372 aaKnown RBP eCLIP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 LYL1P12980 280 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CCL2P13500 99 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 IL12BP29460 328 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CORO1AP31146 461 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CCKBRP32239 447 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OTX2P32243 289 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CTRLP40313 264 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CLDN17P56750 224 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TAS2R31P59538 309 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 UBE2NP61088 152 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZFP36L1Q07352 338 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 MLF2Q15773 248 aaPredicted RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 BSXQ3C1V8 233 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ALKBH6Q3KRA9 238 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 LRRC10Q5BKY1 277 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF506Q5JVG8 444 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ARTNQ5T4W7 220 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 SPATA31B1PQ5VZV4 182 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 FAM90A2PQ658T7 463 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 LCN15Q6UWW0 184 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CPEB2Q7Z5Q1 589 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TGIF2LYQ8IUE0 185 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM217Q8N7C4 229 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR4N2Q8NGD1 307 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR4A5Q8NH83 315 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CLDND2Q8NHS1 167 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 FNDC9Q8TBE3 224 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CYB5D2Q8WUJ1 264 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 UBTD2Q8WUN7 234 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RTN4IP1Q8WWV3 396 aaPredicted RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PTX4Q96A99 478 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 EID2BQ96D98 161 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PRAP1Q96NZ9 151 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZDHHC11Q9H8X9 412 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 NPVFQ9HCQ7 196 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 YAE1D1Q9NRH1 226 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM242Q9NWH2 141 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 MARCH2Q9P0N8 246 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PRSS50Q9UI38 385 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RARRES3Q9UL19 164 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF214Q9UL59 606 aaPredicted RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR51B2Q9Y5P1 312 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 HS3ST4Q9Y661 456 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 IGHV2-26A0A0B4J1V2 119 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 A0A1B0GW64 132 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 A4D1N5 150 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 LRRC3CA6NJW4 275 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 B5MCH6 92 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 C2CD4DB7Z1M9 353 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CATP04040 527 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CKMP06732 381 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 IGLC1P0CG04 106 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 GLI4P10075 376 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ATP6V0CP27449 155 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms