RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SPSB4Q96A44 273 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 HIST1H2AAQ96QV6 131 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 RAB40CQ96S21 281 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 P2RX4Q99571 388 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 FOXB1Q99853 325 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ABHD14AQ9BUJ0 271 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 C1QTNF5Q9BXJ0 243 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 BCL2L14Q9BZR8 327 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OR2H1Q9GZK4 316 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CTDSP1Q9GZU7 261 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PRDM14Q9GZV8 571 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 HIPK2Q9H2X6 1198 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 RIMS4Q9H426 269 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PLK3Q9H4B4 646 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SMOC1Q9H4F8 434 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CRLF2Q9HC73 371 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 GPR35Q9HC97 309 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 Q9N2K0 584 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SLC7A10Q9NS82 523 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 DOK5Q9P104 306 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 LRFN1Q9P244 771 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CA14Q9ULX7 337 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 URGCP-MRPS24S4R325 110 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PRRC2BQ5JSZ5 2229 aaKnown RBP3.03□□□□□ -1.93
COL8A1-204ENST00000462604 MDC1Q14676 2089 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TRPM6Q9BX84 2022 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 IGHV1-45A0A0A0MS14 117 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TRBV6-6A0A0A6YYG2 114 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 OR5H1A6NKK0 313 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ZFP92A6NM28 416 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 IFITM10A6NMD0 228 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CD300LBA8K4G0 201 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RNF212BA8MTL3 300 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CEBPZOSA8MTT3 80 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PROB1E7EW31 1015 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 DEGS1O15121 323 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CXCL13O43927 109 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BKO60814 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PGLYRP1O75594 196 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 NAPSAO96009 420 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 IGHEP01854 428 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BJP06899 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 KLK3P07288 261 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CELA2AP08217 269 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CXCL1P09341 107 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RD3LP0DJH9 198 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 FGF5P12034 268 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 COX6A1P12074 109 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 EDN3P14138 238 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 FABP4P15090 132 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H1BP16401 226 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 BCL3P20749 454 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 FGF7P21781 194 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BOP23527 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 F2RP25116 425 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 EPHA8P29322 1005 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BBP33778 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 MDH2P40926 338 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 FOLR3P41439 243 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HAAOP46952 286 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 NPBWR2P48146 333 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RND2P52198 227 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 MLF1P58340 268 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BDP58876 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RPS18P62269 152 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BCP62807 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RUNX1Q01196 453 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ID3Q02535 119 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM267Q0VDI3 215 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 IL11RAQ14626 422 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PDCD1Q15116 288 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST2H2BEQ16778 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RSPO4Q2I0M5 234 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CEACAM16Q2WEN9 425 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 NRN1LQ496H8 165 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM41BQ5BJD5 291 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PYY3Q5JQD4 70 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PEAR1Q5VY43 1037 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 NCR3LG1Q68D85 454 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF343Q6P1L6 599 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 MRPL14Q6P1L8 145 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 FAM180AQ6UWF9 173 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 SPNS3Q6ZMD2 512 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF600Q6ZNG1 722 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF818PQ6ZRF7 136 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 MRGPRGQ86SM5 289 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 SPEM1Q8N4L4 309 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 Q8NFD4 153 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 OR56B2PQ8NGI1 322 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 OR5R1Q8NH85 324 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 OR10J5Q8NHC4 309 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 MBD3L1Q8WWY6 194 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PSMF1Q92530 271 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 GTF3AQ92664 365 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 NAT6Q93015 286 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BHQ93079 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 LSM10Q969L4 123 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM45BQ96B21 275 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CLDN23Q96B33 292 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms