RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 STUMQ69YW2 141 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 MOB1BQ7L9L4 216 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 OR4S1Q8NGB4 309 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 OR5D13Q8NGL4 314 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 OR5H2Q8NGV7 314 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 ANGPTL6Q8NI99 470 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 TIMD4Q96H15 378 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 MED30Q96HR3 178 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 SNX22Q96L94 193 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF230Q9UIE0 474 aaPredicted RBP12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 ANAPC10Q9UM13 185 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 MGAT4AQ9UM21 535 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 KIR2DS1A0A191URI9 304 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 SSX4O60224 188 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 NAPSAO96009 420 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 GYPAP02724 150 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 KIR2DS4P43632 304 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 IL13RA1P78552 427 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 KRTAP1-1Q07627 177 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 KIR2DS1Q14954 304 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 OXA1LQ15070 435 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 SRSF7Q16629 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 OR52W1Q6IF63 320 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 GDPD3Q7L5L3 318 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 SLC36A1Q7Z2H8 476 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 TMEM17Q86X19 198 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 OR4C16Q8NGL9 310 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 RAB1CQ92928 201 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 ING3Q9NXR8 418 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 COPZ2Q9P299 210 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 ANXA10Q9UJ72 324 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 TRAPPC2LQ9UL33 140 aa12.67□□□□□ -0.38
TMEM39A-203ENST00000461654 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 MGST3O14880 152 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 PSPNO60542 156 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 FSTL3O95633 263 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 F12P00748 615 aaPredicted RBP12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 CD74P04233 296 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 AMY2AP04746 511 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 CSN2P05814 226 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 COL8A2P25067 703 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 OR3A1P47881 315 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 EFNA4P52798 201 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 BTG1P62324 171 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 ATPAF1Q5TC12 328 aaPredicted RBP12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 SLC35E4Q6ICL7 350 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 PLET1Q6UQ28 207 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF497Q6ZNH5 498 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 MUC20Q8N307 709 aaPredicted RBP12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 TMEM185AQ8NFB2 350 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 OR5AP2Q8NGF4 316 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 MAFIPQ8WZ33 124 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 SNAPC3Q92966 411 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 CCL13Q99616 98 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 PRRT1Q99946 306 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 FAM234AQ9H0X4 552 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 Q9N2K0 584 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 KCNIP1Q9NZI2 227 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF222Q9UK12 451 aa12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.38
TMEM39A-203ENST00000461654 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 VGLL3A8MV65 326 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 K7N7A8 449 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 M0QYG6 137 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF737O75373 536 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 PMP2P02689 132 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 TFF1P04155 84 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 LYNX1P0DP58 116 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 GIFP27352 417 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 SLC6A1P30531 599 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 HRH1P35367 487 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 RBMXP38159 391 aaKnown RBP12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 RFX2P48378 723 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 TSPAN5P62079 268 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 CDK10Q15131 360 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 ZMYND11Q15326 602 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF788Q6ZQV5 615 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 GAFA1Q96PS6 74 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 CHODLQ9H9P2 273 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
TMEM39A-203ENST00000461654 MEIKINA0A087WXM9 373 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 TRDCB7Z8K6 153 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 SIGLEC5O15389 551 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms