RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PRSS8Q16651 343 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 TTC32Q5I0X7 151 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 RTN4RL1Q86UN2 441 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 LDLRAD3Q86YD5 345 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 GAPTQ8N292 157 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 ASB5Q8WWX0 329 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 NEU3Q9UQ49 428 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 PAM16Q9Y3D7 125 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 TIAM2Q8IVF5 1701 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 IGSF11Q5DX21 431 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 ABHD3Q8WU67 409 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 EID2BQ96D98 161 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 NEURL2Q9BR09 285 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 SMDT1Q9H4I9 107 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 IL19Q9UHD0 177 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 OR2W1Q9Y3N9 320 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 DLG5Q8TDM6 1919 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 C2CD4DB7Z1M9 353 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 J3QT63 122 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 ADAP1O75689 374 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 PPYP01298 95 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 CDKN2AP42771 156 aaKnown RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF137PP52743 207 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 HYAL1Q12794 435 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 LGALSLQ3ZCW2 172 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 WFDC3Q8IUB2 231 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 TEX29Q8N6K0 151 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 OR2W5A6NFC9 320 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 A8MWL6 223 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 SYNGR1O43759 233 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 FAM53AQ6NSI3 398 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF880Q6PDB4 577 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 RSPO2Q6UXX9 243 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 PRNTQ86SH4 94 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 MOGAT3Q86VF5 341 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 GVQW1Q8N7I0 195 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 RND1Q92730 232 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 UBTD1Q9HAC8 227 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 TNFRSF12AQ9NP84 129 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 KCNE1BA0A087WTH5 132 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 PITX3O75364 302 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 SEC11BP0C7V7 166 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 COMPP49747 757 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 AESQ08117 197 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM78Q5T7P6 136 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 C12orf54Q6X4T0 127 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 LINC01465Q8N7H1 131 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 P2RX4Q99571 388 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 CDX2Q99626 313 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-205ENST00000461221 GHITMQ9H3K2 345 aa7.92□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1W2PQD3 144 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1W2PS18 150 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 PRR35P0CG20 571 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 CCL2P13500 99 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 EMP1P54849 157 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 RAE1P78406 368 aaKnown RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 DNLZQ5SXM8 178 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 CALHM1Q8IU99 346 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 OR4D9Q8NGE8 314 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 ISOC2Q96AB3 205 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 DIRC2Q96SL1 478 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM70Q9BUB7 260 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 IGKV3-7A0A075B6H7 116 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 HYPMO75409 117 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 HOXC4P09017 264 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 LGALS3P17931 250 aaKnown RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 LOXL3P58215 753 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 ECSCRQ19T08 205 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 FAM109BQ6ICB4 259 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 GUSBP11Q6P575 273 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 TP53I13Q8NBR0 393 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 OR51B2Q9Y5P1 312 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 LOXHD1Q8IVV2 1947 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 NUMA1Q14980 2115 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 MEX3AA1L020 520 aaKnown RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 IGHV3-13P01766 116 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 IGHV3-7P01780 117 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 MVDP53602 400 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 UBE2V2Q15819 145 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 PMCHL1Q16048 86 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 COL16A1Q07092 1604 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-205ENST00000461221 LOC389332A0A1B0GUA5 103 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 KBTBD11O94819 623 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 SELENOPP49908 381 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 STPG3Q8N7X2 389 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 SCNM1Q9BWG6 230 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 CCL28Q9NRJ3 127 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 MYH13Q9UKX3 1938 aa7.91□□□□□ -1.14
BRCA1-205ENST00000461221 TMSB15BA0A087X1C1 80 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 H7C2G1 150 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 RBFOX2O43251 390 aaKnown RBP eCLIP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 CTLA4P16410 223 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 DMKNQ6E0U4 476 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 XAF1Q6GPH4 301 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms