RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, human

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC39A1-208	ENST00000461071	PNLIPRP3	Q17RR3	467 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	C9orf66	Q5T8R8	295 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	IZUMO1	Q8IYV9	350 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071		Q8NFD4	153 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	OR5M8	Q8NGP6	311 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	OR13C3	Q8NGS6	347 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	CNIH3	Q8TBE1	160 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	BARHL1	Q9BZE3	327 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ABCG5	Q9H222	651 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ZCCHC4	Q9H5U6	513 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	LIN7C	Q9NUP9	197 aa	Known RBP	13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ING3	Q9NXR8	418 aa		13.63	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RPLP1	P05386	114 aa	Known RBP	13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RPSA	P08865	295 aa	Known RBP	13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	TMEM225B	P0DP42	221 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	GPR12	P47775	334 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	KCNJ3	P48549	501 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	LUM	P51884	338 aa	Predicted RBP	13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	FOXE3	Q13461	319 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PAN3	Q58A45	887 aa	Known RBP	13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SLC25A30	Q5SVS4	291 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PXT1	Q8NFP0	134 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	LEAP2	Q969E1	77 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	EAF1	Q96JC9	268 aa	Predicted RBP	13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	DUX3	Q96PT4	197 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SCOC	Q9UIL1	159 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RYR2	Q92736	4967 aa		13.62	□□□□□ -0.23
SLC39A1-208	ENST00000461071		H0YJX3	145 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	HSD17B6	O14756	317 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	IGHV3-7	P01780	117 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ELANE	P08246	267 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	HTR1A	P08908	422 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	FAS	P25445	335 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	IL13RA2	Q14627	380 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PARP16	Q8N5Y8	322 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	C8orf31	Q8N9H6	132 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	OR5D14	Q8NGL3	314 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	OR10X1	Q8NGY0	326 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	TRUB1	Q8WWH5	349 aa	Known RBP	13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PELI1	Q96FA3	418 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PLSCR3	Q9NRY6	295 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ZNF580	Q9UK33	172 aa		13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.61	□□□□□ -0.23
SLC39A1-208	ENST00000461071	IGHV1-3	A0A0C4DH29	117 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	DAPL1	A0PJW8	107 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	CCRL2	O00421	344 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SULT1B1	O43704	296 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	GAPDH	P04406	335 aa	Known RBP	13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	CHAT	P28329	748 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	CFHR3	Q02985	330 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	GPR50	Q13585	617 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	FHL3	Q13643	280 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	KLHL22	Q53GT1	634 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ZNF691	Q5VV52	312 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SERPINA12	Q8IW75	414 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	LINC00311	Q8N616	119 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071		Q8N9W7	124 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RFESD	Q8TAC1	157 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PLPPR1	Q8TBJ4	325 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	PRR25	Q96S07	402 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RIBC2	Q9H4K1	309 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	IFT22	Q9H7X7	185 aa		13.6	□□□□□ -0.23
SLC39A1-208	ENST00000461071	MPZL2	O60487	215 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	IGHG4	P01861	327 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	HCK	P08631	526 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	GZMH	P20718	246 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SSTR5	P35346	364 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	RAB25	P57735	213 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ALKBH1	Q13686	389 aa	Known RBP	13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	DEFB136	Q30KP8	78 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ZNF529	Q6P280	563 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ASCL4	Q6XD76	172 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	LCNL1	Q6ZST4	164 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ACBD7	Q8N6N7	88 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	TMEM104	Q8NE00	496 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	OR52M1	Q8NGK5	317 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	OR2T10	Q8NGZ9	312 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	MRGPRD	Q8TDS7	321 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	ST6GALNAC6	Q969X2	333 aa		13.59	□□□□□ -0.23
SLC39A1-208	ENST00000461071	SEC14L6	B5MCN3	397 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	HSPB6	O14558	160 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	CD1B	P29016	333 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	ECI1	P42126	302 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	GNG10	P50151	68 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	MOB3B	Q86TA1	216 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	OR8H1	Q8NGG4	311 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	MYOZ3	Q8TDC0	251 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	C4orf3	Q8WVX3	66 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	CPNE2	Q96FN4	548 aa	Predicted RBP	13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	AP4S1	Q9Y587	144 aa		13.58	□□□□□ -0.24
SLC39A1-208	ENST00000461071	LYST	Q99698	3801 aa		13.57	□□□□□ -0.24
SLC39A1-208	ENST00000461071	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.57	□□□□□ -0.24
SLC39A1-208	ENST00000461071	NCBP2L	A6PVI3	153 aa	Known RBP	13.57	□□□□□ -0.24
SLC39A1-208	ENST00000461071	EBAG9	O00559	213 aa		13.57	□□□□□ -0.24
SLC39A1-208	ENST00000461071	FCGR1A	P12314	374 aa		13.57	□□□□□ -0.24
SLC39A1-208	ENST00000461071	INSL3	P51460	131 aa		13.57	□□□□□ -0.24
SLC39A1-208	ENST00000461071	SNRPG	P62308	76 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms