RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 P2RX4Q99571 388 aa17.02■□□□□ 0.32
CPNE1-220ENST00000458038 TRAV24A0A0B4J272 114 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 UTF1Q5T230 341 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 SLC35E3Q7Z769 313 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 Q8NFD4 153 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 OR10X1Q8NGY0 326 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 OR5AK2Q8NH90 309 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 NOL4LQ96MY1 436 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-220ENST00000458038 GON7Q9BXV9 100 aa17.01■□□□□ 0.31
CPNE1-220ENST00000458038 KMT2CQ8NEZ4 4911 aaKnown RBP17.01■□□□□ 0.31
CPNE1-220ENST00000458038 SAC3D1A6NKF1 404 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 HSPB6O14558 160 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 RAMP3O60896 148 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 ALPLP05186 524 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 CCDC159P0C7I6 412 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 GZMHP20718 246 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 EBI3Q14213 229 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 RSBN1Q5VWQ0 802 aaPredicted RBP17■□□□□ 0.31
CPNE1-220ENST00000458038 TEX38Q6PEX7 206 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 ZNF695Q8IW36 515 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 KLHL30-AS1Q8NEE0 82 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 ALG8Q9BVK2 526 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 FAM118AQ9NWS6 357 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 DHDHQ9UQ10 334 aa17■□□□□ 0.31
CPNE1-220ENST00000458038 H0YHG0 523 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 ZFPL1O95159 310 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 FADS2O95864 444 aaKnown RBP16.99■□□□□ 0.31
CPNE1-220ENST00000458038 IGKV1D-33P01593 117 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 IGKV1-33P01594 117 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 GAPDHP04406 335 aaKnown RBP16.99■□□□□ 0.31
CPNE1-220ENST00000458038 NHLRC4P0CG21 123 aaPredicted RBP16.99■□□□□ 0.31
CPNE1-220ENST00000458038 RAB3AP20336 220 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 DGCR2P98153 550 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 ZNF816Q0VGE8 651 aaPredicted RBP16.99■□□□□ 0.31
CPNE1-220ENST00000458038 HNF4GQ14541 408 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 RSU1Q15404 277 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 C8orf86Q6ZUL3 223 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 STPG2Q8N412 459 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 LEAP2Q969E1 77 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 LGALS12Q96DT0 336 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 GPER1Q99527 375 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 IFT22Q9H7X7 185 aa16.99■□□□□ 0.31
CPNE1-220ENST00000458038 AP4M1O00189 453 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 CCRL2O00421 344 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 IGHV3-7P01780 117 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 ZNF529Q6P280 563 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 ASCL4Q6XD76 172 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 LHFPL3Q86UP9 236 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 TGIF2LXQ8IUE1 241 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 OR52M1Q8NGK5 317 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 RFESDQ8TAC1 157 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 MRGPRDQ8TDS7 321 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 TNFAIP8L1Q8WVP5 186 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 TSEN15Q8WW01 171 aaKnown RBP16.98■□□□□ 0.31
CPNE1-220ENST00000458038 Q96MT0 163 aa16.98■□□□□ 0.31
CPNE1-220ENST00000458038 HSD17B6O14756 317 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 MPZL2O60487 215 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 CIB2O75838 187 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 GNG10P50151 68 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 GBX2P52951 348 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-220ENST00000458038 PNLIPRP3Q17RR3 467 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 SATL1Q86VE3 508 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 C8orf31Q8N9H6 132 aa16.97■□□□□ 0.31
CPNE1-220ENST00000458038 LIN7CQ9NUP9 197 aaKnown RBP16.97■□□□□ 0.31
CPNE1-220ENST00000458038 IGHV1-3A0A0C4DH29 117 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 CCL24O00175 119 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 ALDH3A2P51648 485 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 DIAPH2-AS1Q14236 149 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 ZSCAN26Q16670 478 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 LTC4SQ16873 150 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 NHLRC3Q5JS37 347 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 C18orf65Q6ZTR6 163 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 MOB3BQ86TA1 216 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 IZUMO1Q8IYV9 350 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 LINC00311Q8N616 119 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 OR2T10Q8NGZ9 312 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 PLPPR1Q8TBJ4 325 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 PDCD1LG2Q9BQ51 273 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 DPCDQ9BVM2 203 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-220ENST00000458038 ABCG5Q9H222 651 aa16.96■□□□□ 0.31
CPNE1-220ENST00000458038 ISG20L2Q9H9L3 353 aaKnown RBP16.96■□□□□ 0.31
CPNE1-220ENST00000458038 DNAH9Q9NYC9 4486 aa16.96■□□□□ 0.3
CPNE1-220ENST00000458038 NCBP2LA6PVI3 153 aaKnown RBP16.95■□□□□ 0.3
CPNE1-220ENST00000458038 GABRPO00591 440 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 CD2P06729 351 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 VSIG8P0DPA2 414 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 SSTR5P35346 364 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 RAB40BQ12829 278 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 PIGYQ3MUY2 71 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 Q3ZCU0 254 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 KLHL22Q53GT1 634 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 CXorf66Q5JRM2 361 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-220ENST00000458038 LINC00596Q86U02 117 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 SUMF2Q8NBJ7 301 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 EAF1Q96JC9 268 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-220ENST00000458038 PAK1IP1Q9NWT1 392 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-220ENST00000458038 ERVK13-1Q9NX77 482 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 IL36GQ9NZH8 169 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 LINC00527Q9UJ94 153 aa16.95■□□□□ 0.3
CPNE1-220ENST00000458038 EI24O14681 340 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms