RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TNFSF8P32971 234 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 MEF2CQ06413 473 aaPredicted RBP11.68□□□□□ -0.54
LINC00887-204ENST00000456816 IL18Q14116 193 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 PNLIPRP3Q17RR3 467 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF260Q3ZCT1 412 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 DCAF12L2Q5VW00 463 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 HACD4Q5VWC8 232 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF565Q8N9K5 539 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 NUDCD2Q8WVJ2 157 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 CYYR1Q96J86 154 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 C18orf12Q96KH6 178 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
LINC00887-204ENST00000456816 RIMS4Q9H426 269 aaPredicted RBP11.68□□□□□ -0.54
LINC00887-204ENST00000456816 AUNIPQ9H7T9 357 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 HIF1ANQ9NWT6 349 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 KCNIP1Q9NZI2 227 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 LINC00312Q9Y6C7 94 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 A0A0G2JMP0 313 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 A0A0X1KG70 313 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 MT-ND4P03905 459 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 INHBBP09529 407 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 CD99P14209 185 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 PITPNAQ00169 270 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 RNASE12Q5GAN4 147 aaKnown RBP11.67□□□□□ -0.54
LINC00887-204ENST00000456816 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 C6orf183Q5T699 404 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 TMEM200BQ69YZ2 307 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 FAM131AQ6UXB0 335 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 MOB1BQ7L9L4 216 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 OR4M2Q8NGB6 313 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 OR6Q1Q8NGQ2 317 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 C15orf40Q8WUR7 153 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 C1orf159Q96HA4 380 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 WDFY2Q96P53 400 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 GAL3ST2Q9H3Q3 398 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 MMP26Q9NRE1 261 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 ELF5Q9UKW6 265 aaPredicted RBP11.67□□□□□ -0.54
LINC00887-204ENST00000456816 KCNK7Q9Y2U2 307 aa11.67□□□□□ -0.54
LINC00887-204ENST00000456816 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 hCG_1809904A0A1W2PP81 198 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 A0A1W2PPE2 198 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 A0A1W2PR64 198 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 A0A1W2PRV1 198 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 FABP12A6NFH5 140 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 PTHLHP12272 177 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 PRSS3P35030 304 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
LINC00887-204ENST00000456816 PAX5Q02548 391 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF273Q14593 569 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 METTL11BQ5VVY1 283 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 FAHD2BQ6P2I3 314 aaPredicted RBP11.66□□□□□ -0.54
LINC00887-204ENST00000456816 PRR18Q8N4B5 295 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 OR13A1Q8NGR1 328 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 C8orf46Q8TAG6 207 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 MRPL30Q8TCC3 161 aaKnown RBP11.66□□□□□ -0.54
LINC00887-204ENST00000456816 FAHD2AQ96GK7 314 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF714Q96N38 554 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 IFT46Q9NQC8 304 aa11.66□□□□□ -0.54
LINC00887-204ENST00000456816 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00887-204ENST00000456816 POLR3KQ9Y2Y1 108 aaPredicted RBP11.66□□□□□ -0.54
LINC00887-204ENST00000456816 UBE2J1Q9Y385 318 aaPredicted RBP11.66□□□□□ -0.54
LINC00887-204ENST00000456816 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 FCGR3AP08637 254 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF728P0DKX0 622 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 CCL3L1P16619 93 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 GATA3P23771 443 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 ARF6P62330 175 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 LY6G5BQ8NDX9 201 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 GCDHQ92947 438 aaPredicted RBP11.65□□□□□ -0.54
LINC00887-204ENST00000456816 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 NCOR1P1Q9H4R4 102 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 RAB9BQ9NP90 201 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 RABL2AQ9UBK7 228 aaPredicted RBP11.65□□□□□ -0.54
LINC00887-204ENST00000456816 KCNS2Q9ULS6 477 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 MGAT4AQ9UM21 535 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 RABL2BQ9UNT1 228 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
LINC00887-204ENST00000456816 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
LINC00887-204ENST00000456816 CREBBPQ92793 2442 aa11.65□□□□□ -0.55
LINC00887-204ENST00000456816 ITPR3Q14573 2671 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 MEIS3P1A6NDR6 274 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 ZNF729A6NN14 1252 aaPredicted RBP11.64□□□□□ -0.55
LINC00887-204ENST00000456816 SPINT2O43291 252 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 NAPSAO96009 420 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 RCC1P18754 421 aaPredicted RBP11.64□□□□□ -0.55
LINC00887-204ENST00000456816 GZMHP20718 246 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 DTYMKP23919 212 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 CBX5P45973 191 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 LTC4SQ16873 150 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 PYDC2Q56P42 97 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 PYHIN1Q6K0P9 492 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 KIR3DL3Q8N743 410 aa11.64□□□□□ -0.55
LINC00887-204ENST00000456816 UBALD1Q8TB05 177 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms