RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 POLDIP2Q9Y2S7 368 aa10□□□□□ -0.81
VTA1-203ENST00000452973 HSPA12AO43301 675 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 GCH1P30793 250 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 PMELP40967 661 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 Q6ZS92 163 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 OR10J5Q8NHC4 309 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 RSRP1Q9BUV0 290 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 ERRFI1Q9UJM3 462 aaPredicted RBP9.99□□□□□ -0.81
VTA1-203ENST00000452973 PURGQ9UJV8 347 aaKnown RBP9.99□□□□□ -0.81
VTA1-203ENST00000452973 RBM7Q9Y580 266 aaKnown RBP9.99□□□□□ -0.81
VTA1-203ENST00000452973 SPTA1P02549 2419 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 IGHV1-18A0A0C4DH31 117 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 TUBAL3A6NHL2 446 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 K7EPK0 472 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 M0R1B8 84 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 IL15RAQ13261 267 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 IGFL3Q6UXB1 125 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 LGI3Q8N145 548 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 FAM71E2Q8N5Q1 922 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 MSI2Q96DH6 328 aaKnown RBP9.99□□□□□ -0.81
VTA1-203ENST00000452973 GALNT14Q96FL9 552 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 LINC00052Q96N35 136 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 SUCNR1Q9BXA5 334 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 REG4Q9BYZ8 158 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 OR1A1Q9P1Q5 309 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 FBXO9Q9UK97 447 aaPredicted RBP9.99□□□□□ -0.81
VTA1-203ENST00000452973 FAM215AQ9Y5M1 114 aa9.99□□□□□ -0.81
VTA1-203ENST00000452973 DIDO1Q9BTC0 2240 aaKnown RBP9.99□□□□□ -0.81
VTA1-203ENST00000452973 SIGLEC5O15389 551 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 CNOT4O95628 575 aaKnown RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 MBPP02686 304 aaPredicted RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 RPL12P30050 165 aaKnown RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 EIF2S3P41091 472 aaKnown RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 Q6P435 159 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 OR8G5Q8NG78 346 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 ABHD17AQ96GS6 310 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 ESRP2Q9H6T0 727 aaKnown RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 TAS2R3Q9NYW6 316 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 IGHV2OR16-5A0A0B4J2B6 119 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 MFSD2BA6NFX1 497 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 OR5H1A6NKK0 313 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 CGAP01215 116 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 BMP5P22003 454 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 UCP3P55916 312 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 IL13RA2Q14627 380 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 FAM76BQ5HYJ3 339 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 BEND4Q6ZU67 534 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 ZNF695Q8IW36 515 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 OR51H1Q8NH63 302 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 S100PBPQ96BU1 408 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 ASF1BQ9NVP2 202 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 SESN1Q9Y6P5 492 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 PRSS44E7EML9 344 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 J3QW42 95 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 SH2D1BO14796 132 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 ZNF474Q6S9Z5 364 aaPredicted RBP9.98□□□□□ -0.81
VTA1-203ENST00000452973 Q6ZR03 302 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 NRIP2Q9BQI9 281 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 NARFLQ9H6Q4 476 aa9.98□□□□□ -0.81
VTA1-203ENST00000452973 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 MBD3L4A6NDZ8 208 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 MBD3L3A6NE82 208 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 MBD3L5A6NJ08 208 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 MKRN2OSH3BPM6 223 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 FBXO24O75426 580 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 PGA5P0DJD9 388 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 HKR1P10072 659 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 ZNF718Q3SXZ3 478 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 LINC00596Q86U02 117 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 LRP11Q86VZ4 500 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 MBD3L2Q8NHZ7 208 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 POM121Q96HA1 1249 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 NARS2Q96I59 477 aaKnown RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 PRRX2Q99811 253 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 PLCE1Q9P212 2302 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 ADGRG4Q8IZF6 3080 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 GPR31O00270 319 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 DEDDO75618 318 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 ZNF16P17020 682 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 P2RY6Q15077 328 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 PCSK4Q6UW60 755 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 CISD2Q8N5K1 135 aaKnown RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 TPRX1Q8N7U7 411 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 C1orf162Q8NEQ5 155 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 OR2Z1Q8NG97 314 aa9.97□□□□□ -0.81
VTA1-203ENST00000452973 GTF3AQ92664 365 aaKnown RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 RIMS4Q9H426 269 aaPredicted RBP9.97□□□□□ -0.81
VTA1-203ENST00000452973 NKX2-6A6NCS4 301 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 PSPNO60542 156 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 HAND1O96004 215 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms