RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ODAMA1E959 279 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
SCN9A-204ENST00000452182 INHBBP09529 407 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 GLIPR1P48060 266 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 PNLIPRP3Q17RR3 467 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 CR1LQ2VPA4 569 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 TMEM186Q96B77 213 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 WDFY2Q96P53 400 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 MIXL1Q9H2W2 232 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 C19orf12Q9NSK7 152 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 OR6C3Q9NZP0 311 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 LINC00312Q9Y6C7 94 aa9.56□□□□□ -0.88
SCN9A-204ENST00000452182 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.56□□□□□ -0.887e-10■■■■■ 56
SCN9A-204ENST00000452182 ZANQ9Y493 2812 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 TRBV6-6A0A0A6YYG2 114 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 UBE2QL1A1L167 161 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 NAPSAO96009 420 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 MT-ND4P03905 459 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 MELTFP08582 738 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 PPIAL4GP0DN37 164 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 CD99P14209 185 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 GNB3P16520 340 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 MNDAP41218 407 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 KRTAP1-1Q07627 177 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 CNPY1Q3B7I2 92 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 CDNFQ49AH0 187 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 TMEM69Q5SWH9 247 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 HACD4Q5VWC8 232 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 TMEM200BQ69YZ2 307 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 BTNL3Q6UXE8 466 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 RTN4RL2Q86UN3 420 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 GLCCI1Q86VQ1 547 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 LAX1Q8IWV1 398 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 KIR3DL3Q8N743 410 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 TPRX1Q8N7U7 411 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 OR4M1Q8NGD0 313 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 DYRK2Q92630 601 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 LPAR2Q9HBW0 351 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 MMP26Q9NRE1 261 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 AK3Q9UIJ7 227 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 KIF25Q9UIL4 384 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 UBE2J1Q9Y385 318 aaPredicted RBP9.55□□□□□ -0.88
SCN9A-204ENST00000452182 INSIG2Q9Y5U4 225 aa9.55□□□□□ -0.88
SCN9A-204ENST00000452182 ARHGAP32A7KAX9 2087 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 TRAV18A0A075B6X5 111 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 MEIKINA0A087WXM9 373 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 TRGV10A0A0A0MS01 117 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 FAM25AB3EWG3 89 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 FAM25CB3EWG5 89 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 FAM25GB3EWG6 89 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 CD5LO43866 347 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 TGFAP01135 160 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 GZMHP20718 246 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 TALDO1P37837 337 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 PITPNAQ00169 270 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 C1orf122Q6ZSJ8 110 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 TCF23Q7RTU1 214 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF554Q86TJ5 538 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF565Q8N9K5 539 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 MRPL30Q8TCC3 161 aaKnown RBP9.54□□□□□ -0.88
SCN9A-204ENST00000452182 CYYR1Q96J86 154 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 CMSS1Q9BQ75 279 aaKnown RBP9.54□□□□□ -0.88
SCN9A-204ENST00000452182 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 ZMAT3Q9HA38 289 aaKnown RBP9.54□□□□□ -0.88
SCN9A-204ENST00000452182 C12orf4Q9NQ89 552 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 MBNL3Q9NUK0 354 aaKnown RBP9.54□□□□□ -0.88
SCN9A-204ENST00000452182 HIF1ANQ9NWT6 349 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 TAS2R3Q9NYW6 316 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 RABL2AQ9UBK7 228 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-204ENST00000452182 RABL2BQ9UNT1 228 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 KPTNQ9Y664 436 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 MED13LQ71F56 2210 aa9.54□□□□□ -0.88
SCN9A-204ENST00000452182 A0A0G2JMP0 313 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 A0A0X1KG70 313 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 A0A1W2PQ09 198 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 J3QLI3 93 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 M0R1W7 72 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 CLPXO76031 633 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 RBP4P02753 201 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 CD3GP09693 182 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 CGB3P0DN86 165 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 CGB7P0DN87 165 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 S100A5P33763 92 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 TAS2R20P59543 309 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 PAX8Q06710 450 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF273Q14593 569 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 DCAF12L2Q5VW00 463 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 OLFML2AQ68BL7 652 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 TRAT1Q6PIZ9 186 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 BAIAP2L2Q6UXY1 529 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 LINC00299Q6ZSB3 139 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 FAM185AQ8N0U4 392 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 OR4M2Q8NGB6 313 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 C15orf40Q8WUR7 153 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 LINC00574Q9H8X3 128 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 PTTG2Q9NZH5 202 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 EXTL2Q9UBQ6 330 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms