RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CGB3P0DN86 165 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 CGB7P0DN87 165 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 IGFBP3P17936 291 aaPredicted RBP12.25□□□□□ -0.45
CHD3-205ENST00000449744 RBM11P57052 281 aaKnown RBP12.25□□□□□ -0.45
CHD3-205ENST00000449744 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
CHD3-205ENST00000449744 LTC4SQ16873 150 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 NHLRC3Q5JS37 347 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 ATAD3CQ5T2N8 411 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 OGFRL1Q5TC84 451 aaPredicted RBP12.25□□□□□ -0.45
CHD3-205ENST00000449744 RSBN1Q5VWQ0 802 aaPredicted RBP12.25□□□□□ -0.45
CHD3-205ENST00000449744 AHSA2Q719I0 299 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 LINC00596Q86U02 117 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 BPIFB6Q8NFQ5 453 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 PLPPR1Q8TBJ4 325 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 SLC25A33Q9BSK2 321 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 MMP28Q9H239 520 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 LIN7BQ9HAP6 207 aa12.25□□□□□ -0.45
CHD3-205ENST00000449744 A0A1W2PPK0 400 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 CASQ2O14958 399 aaPredicted RBP12.24□□□□□ -0.45
CHD3-205ENST00000449744 XPNPEP2O43895 674 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 GPX5O75715 221 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 GNAO1P09471 354 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 GTF2F2P13984 249 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 PAX5Q02548 391 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 EMX1Q04741 257 aaPredicted RBP12.24□□□□□ -0.45
CHD3-205ENST00000449744 GPR176Q14439 515 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 MPV17LQ2QL34 196 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 SLC22A6Q4U2R8 563 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 Q6ZS46 218 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 LYG1Q8N1E2 194 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 JAGN1Q8N5M9 183 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 ZNF485Q8NCK3 441 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 RFESDQ8TAC1 157 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 NEK7Q8TDX7 302 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 TOMM40LQ969M1 308 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 RPEQ96AT9 228 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 PGLYRP3Q96LB9 341 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 OR14A2Q96R54 314 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 IFT22Q9H7X7 185 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 PSORS1C1Q9UIG5 152 aa12.24□□□□□ -0.45
CHD3-205ENST00000449744 TRAV8-7A0A075B6U6 113 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 TMEM30CPA0ZSE6 113 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 J3QR06 171 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 GEMIN2O14893 280 aaKnown RBP12.23□□□□□ -0.45
CHD3-205ENST00000449744 OR2F2O95006 317 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 IGHV3-7P01780 117 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 CD28P10747 220 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 FSTP19883 344 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 WNT4P56705 351 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 RPS11P62280 158 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHD3-205ENST00000449744 C1QL4Q86Z23 238 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 OR10A7Q8NGE5 316 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 LEAP2Q969E1 77 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 MUL1Q969V5 352 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 WNT10AQ9GZT5 417 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 PLCXD1Q9NUJ7 323 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 ERGIC3Q9Y282 383 aa12.23□□□□□ -0.45
CHD3-205ENST00000449744 MRPS28Q9Y2Q9 187 aaKnown RBP12.23□□□□□ -0.45
CHD3-205ENST00000449744 TRAV39A0A0B4J263 110 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 A0A1W2PP11 408 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 MAGEA13PA6NCF6 341 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 NPIPB11E5RHQ5 1161 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 ANKRD65E5RJM6 399 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 LY6LH3BQJ8 138 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 OPN1MWP04001 364 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 MAS1P04201 325 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 FAM106CPP0CH98 169 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 OPN1MW2P0DN77 364 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 OPN1MW3P0DN78 364 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 CELP19835 753 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 GZMHP20718 246 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 SSTR5P35346 364 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 GNG10P50151 68 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 MADCAM1Q13477 382 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 UTF1Q5T230 341 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 LAIR2Q6ISS4 152 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 SLC16A12Q6ZSM3 486 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 THRSPQ92748 146 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 RBM14Q96PK6 669 aaKnown RBP12.22□□□□□ -0.45
CHD3-205ENST00000449744 CITED2Q99967 270 aaPredicted RBP12.22□□□□□ -0.45
CHD3-205ENST00000449744 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 ZNF581Q9P0T4 197 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 PSG11Q9UQ72 335 aa12.22□□□□□ -0.45
CHD3-205ENST00000449744 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 M0QZK8 103 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 CD1AP06126 327 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 LPLP06858 475 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 MAPK3P27361 379 aaPredicted RBP12.21□□□□□ -0.45
CHD3-205ENST00000449744 DOC2BQ14184 412 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 ABCA11PQ4W5N1 156 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 AWAT2Q6E213 333 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 CENPVQ7Z7K6 275 aaPredicted RBP12.21□□□□□ -0.45
CHD3-205ENST00000449744 CDH26Q8IXH8 852 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 NANOGP1Q8N7R0 232 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 OR4F17Q8NGA8 305 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms