RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 C1orf159Q96HA4 380 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 SCPEP1Q9HB40 452 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 AKIP1Q9NQ31 210 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 LPAR3Q9UBY5 353 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 POM121CA8CG34 1229 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 SULT1C2O00338 296 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 CTDSPLO15194 276 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 SSX5O60225 188 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 DTYMKP23919 212 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 ZFP36P26651 326 aaKnown RBP12.1□□□□□ -0.47
SHANK2-210ENST00000449116 ZNF45Q02386 682 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 MEF2CQ06413 473 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-210ENST00000449116 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 C8orf46Q8TAG6 207 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 S100ZQ8WXG8 99 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 C19orf12Q9NSK7 152 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 RPUSD1Q9UJJ7 312 aaKnown RBP12.1□□□□□ -0.47
SHANK2-210ENST00000449116 TRAPPC2LQ9UL33 140 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 MALRD1Q5VYJ5 2156 aa12.1□□□□□ -0.47
SHANK2-210ENST00000449116 TRGV10A0A0A0MS01 117 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 MEIOCA2RUB1 952 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 C22orf46C9J442 243 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 LPLP06858 475 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 FCGR3AP08637 254 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 CBX5P45973 191 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 LCN2P80188 198 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 GUCA2AQ02747 115 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 ZNF79Q15937 498 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 TMEM200BQ69YZ2 307 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 ZNF880Q6PDB4 577 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 MOB1BQ7L9L4 216 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 TCF23Q7RTU1 214 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 TRAPPC6BQ86SZ2 158 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 FAM185AQ8N0U4 392 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 ZNF565Q8N9K5 539 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 OR13A1Q8NGR1 328 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 SETD6Q8TBK2 473 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 POLR3KQ9Y2Y1 108 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-210ENST00000449116 LINC00312Q9Y6C7 94 aa12.09□□□□□ -0.47
SHANK2-210ENST00000449116 PPIAL4CA0A0B4J2A2 164 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 A0A1W2PQ09 198 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 B4DSR2 109 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 GABARAPH6UMI1 98 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 ENSAO43768 121 aaKnown RBP12.08□□□□□ -0.48
SHANK2-210ENST00000449116 PPIAL4GP0DN37 164 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 GLP1RP43220 463 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 LSAMPQ13449 338 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF273Q14593 569 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 PYDC2Q56P42 97 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 C6orf183Q5T699 404 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 Q6ZPA2 131 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 LINC01356Q8N9X3 169 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 LY6G5BQ8NDX9 201 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 MRGPRDQ8TDS7 321 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 SMIM4Q8WVI0 70 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 CORO2AQ92828 525 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 DMRTB1Q96MA1 342 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 OCSTAMPQ9BR26 566 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 LPAR2Q9HBW0 351 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 Q9N2K0 584 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 MBNL3Q9NUK0 354 aaKnown RBP12.08□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-210ENST00000449116 MGAT4AQ9UM21 535 aa12.08□□□□□ -0.48
SHANK2-210ENST00000449116 UBE2J1Q9Y385 318 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-210ENST00000449116 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 IGHV2-70DA0A0C4DH43 119 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
SHANK2-210ENST00000449116 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 GSTZ1O43708 216 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-210ENST00000449116 LIPFP07098 398 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 INHBBP09529 407 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 RCC1P18754 421 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-210ENST00000449116 DGCR2P98153 550 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 PAX2Q02962 417 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 SRSF7Q16629 238 aaKnown RBP eCLIP12.07□□□□□ -0.484e-9■■■■■ 29.7
SHANK2-210ENST00000449116 CR1LQ2VPA4 569 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 RNASE12Q5GAN4 147 aaKnown RBP12.07□□□□□ -0.48
SHANK2-210ENST00000449116 GDPD1Q8N9F7 314 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 OR52I2Q8NH67 350 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 FCAMRQ8WWV6 532 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-210ENST00000449116 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
SHANK2-210ENST00000449116 IFT46Q9NQC8 304 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 TAS2R3Q9NYW6 316 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
SHANK2-210ENST00000449116 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 KIR2DS1A0A191URI9 304 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms