RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PDLIM3Q53GG5 364 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 FAM74A1Q5RGS3 127 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 LPCAT3Q6P1A2 487 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 REC114Q7Z4M0 266 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMED4Q7Z7H5 227 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SAMD12Q8N8I0 201 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 PLPP7Q8NBV4 271 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 WFDC11Q8NEX6 87 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR5A2Q8NGI9 324 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 TERB2Q8NHR7 220 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ISOC1Q96CN7 298 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 FOXC2Q99958 501 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 V9GY05 133 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 H3BMH7 237 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 H3BUX3 64 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 HSD17B6O14756 317 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MAGEB4O15481 346 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 PTP4A3O75365 173 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SCGB1A1P11684 91 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SHC1P29353 583 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 P2RY14Q15391 338 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM179BQ7Z7N9 219 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OSR2Q8N2R0 312 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 LILRB2Q8N423 598 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR5AU1Q8NGC0 362 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR51E2Q9H255 320 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 TREM1Q9NP99 234 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MED12LQ86YW9 2145 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGHV3-72A0A0B4J1Y9 119 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 H3BSA7 217 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 HOXA3O43365 443 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 GNG7O60262 68 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 TOXO94900 526 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 LYL1P12980 280 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 RPL35AP18077 110 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 S100PP25815 95 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 S100A10P60903 97 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ADGRG5Q8IZF4 528 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR8B4Q96RC9 309 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 DCAF16Q9NXF7 216 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 AASSQ9UDR5 926 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 A0A1W2PNU3 283 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 A0A1W2PS18 150 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 OOEPA6NGQ2 149 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 DKK1O94907 266 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 WNT2P09544 360 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 DTYMKP23919 212 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 MRPS10P82664 201 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF474Q6S9Z5 364 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 CATSPERDQ86XM0 798 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR52N1Q8NH53 320 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC6A13Q9NSD5 602 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 FAM240BA0A1B0GVZ2 78 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 A0A1W2PN81 502 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZFP92A6NM28 416 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 J3KRW8 73 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 CTAG2O75638 210 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 CHRNA7P36544 502 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 HPSE2Q8WWQ2 592 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 RAB40AQ8WXH6 277 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM56Q96MV1 263 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 C20orf141Q9NUB4 165 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 RFPL4AA6NLU0 287 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 RFPL4AL1F8VTS6 287 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 K7EQM0 130 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 TRAF3IP2O43734 574 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 HLA-DOBP13765 273 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 VEGFCP49767 419 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 SCAND1P57086 179 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 HLXQ14774 488 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 RPRMLQ8N4K4 120 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 BPIFCQ8NFQ6 507 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR10K1Q8NGX5 313 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 CNIH3Q8TBE1 160 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 FAM216AQ8WUB2 273 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 M0R1X1 148 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 MGST3O14880 152 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ST8SIA3O43173 380 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 LY6G6CO95867 125 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 F12P00748 615 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 PRDX2P32119 198 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 KCNJ3P48549 501 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 YIF1BQ5BJH7 314 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF626Q68DY1 528 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 LEMD1Q68G75 181 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR2D3Q8NGH3 330 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 GAR1Q9NY12 217 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 A0A1B0GVC2 190 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 M0R2Z0 102 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 EGR1P18146 543 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 CCR9P51686 369 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 TM4SF20Q53R12 229 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ACTBL2Q562R1 376 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 GPR107Q5VW38 600 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 SGK3Q96BR1 496 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 MUS81Q96NY9 551 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 PSMG3Q9BT73 122 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF471Q9BX82 626 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms