RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 HPSE2Q8WWQ2 592 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 NTNG2Q96CW9 530 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 TMEM222Q9H0R3 208 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 ZNF724A8MTY0 619 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 J3QW42 95 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 TAGLN2P37802 199 aaKnown RBP11.1□□□□□ -0.63
SHC1-210ENST00000448116 RAB5CP51148 216 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 ARF1P84077 181 aaKnown RBP11.1□□□□□ -0.63
SHC1-210ENST00000448116 SLC25A24Q6NUK1 477 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 VHLLQ6RSH7 139 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 ZNF818PQ6ZRF7 136 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 RNASE11Q8TAA1 199 aaKnown RBP11.1□□□□□ -0.63
SHC1-210ENST00000448116 KCNE4Q8WWG9 221 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 CRIM1Q9NZV1 1036 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 DNAJC13O75165 2243 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 IGKV1D-13A0A0B4J2D9 117 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 FBP1P09467 338 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 IGKV1-13P0DP09 117 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 PRDX4Q13162 271 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 SPINK14Q6IE38 97 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 MRPL21Q7Z2W9 205 aaKnown RBP11.1□□□□□ -0.63
SHC1-210ENST00000448116 OR1J1Q8NGS3 322 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 RNF122Q9H9V4 155 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 MMP24Q9Y5R2 645 aa11.1□□□□□ -0.63
SHC1-210ENST00000448116 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 HS3ST1O14792 307 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 OR2C1O95371 312 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 DYNLT3P51808 116 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 UCP3P55916 312 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 ZNF266Q14584 549 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 ACER2Q5QJU3 275 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 WDR5BQ86VZ2 330 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 TMEM252Q8N6L7 170 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 RDH5Q92781 318 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 ZNF488Q96MN9 340 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 ZNF251Q9BRH9 671 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 PILRBQ9UKJ0 227 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 ZNF732B4DXR9 585 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 HSPA12AO43301 675 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 JMJD7P0C870 316 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 RPS10P46783 165 aaKnown RBP11.09□□□□□ -0.63
SHC1-210ENST00000448116 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
SHC1-210ENST00000448116 IZUMO4Q1ZYL8 232 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 TMEM171Q8WVE6 324 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 HLA-CQ95604 372 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 CPNE4Q96A23 557 aaPredicted RBP11.09□□□□□ -0.63
SHC1-210ENST00000448116 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 PLEKHF2Q9H8W4 249 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 LIPGQ9Y5X9 500 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 R4GN57 208 aa11.09□□□□□ -0.63
SHC1-210ENST00000448116 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 K7N7A8 449 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
SHC1-210ENST00000448116 FOLR2P14207 255 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 Q0VFX4 171 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 OR8B8Q15620 311 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 LPAL2Q16609 132 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 OR2B11Q5JQS5 317 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 TGIF2LXQ8IUE1 241 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 SELENOHQ8IZQ5 122 aaKnown RBP11.08□□□□□ -0.64
SHC1-210ENST00000448116 IL1F10Q8WWZ1 152 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 CHST1O43916 411 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 CDS2O95674 445 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 ZNF154Q13106 437 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 PMS2CLQ68D20 193 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 PRRG4Q9BZD6 226 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 RBFOX3A6NFN3 312 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 TRAPPC2LH3BP13 241 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 IGHV2-70P01814 119 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 CYB561P49447 251 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 SRPXP78539 464 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 IGFBP7Q16270 282 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 NCMAPQ5T1S8 102 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 HIST1H2AAQ96QV6 131 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 EGLN1Q9GZT9 426 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 SMOC1Q9H4F8 434 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 ZNF391Q9UJN7 358 aa11.08□□□□□ -0.64
SHC1-210ENST00000448116 TRAV39A0A0B4J263 110 aa11.07□□□□□ -0.64
SHC1-210ENST00000448116 PROB1E7EW31 1015 aa11.07□□□□□ -0.64
SHC1-210ENST00000448116 DNPH1O43598 174 aa11.07□□□□□ -0.64
SHC1-210ENST00000448116 RNF212Q495C1 297 aa11.07□□□□□ -0.64
SHC1-210ENST00000448116 AKR1C8PQ5T2L2 129 aa11.07□□□□□ -0.64
SHC1-210ENST00000448116 MKXQ8IYA7 352 aa11.07□□□□□ -0.64
SHC1-210ENST00000448116 ZNF100Q8IYN0 542 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms