RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CCDC107Q8WV48 283 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 COQ2Q96H96 371 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 DCTN5Q9BTE1 182 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 MMP27Q9H306 513 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 CHMP1AQ9HD42 196 aaPredicted RBP14.22□□□□□ -0.13
LIME1-202ENST00000444951 C19orf12Q9NSK7 152 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 EXTL2Q9UBQ6 330 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 LPAR3Q9UBY5 353 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 AK3Q9UIJ7 227 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 KIF25Q9UIL4 384 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 ADAM30Q9UKF2 790 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 ELF5Q9UKW6 265 aaPredicted RBP14.22□□□□□ -0.13
LIME1-202ENST00000444951 MEIKINA0A087WXM9 373 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 PTHLHP12272 177 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 S100A5P33763 92 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 P2RX3P56373 397 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 RPL31P62899 125 aaKnown RBP14.21□□□□□ -0.13
LIME1-202ENST00000444951 ARFRP1Q13795 201 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 CD276Q5ZPR3 534 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 CNIH2Q6PI25 160 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 TRAPPC6BQ86SZ2 158 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 LINC01356Q8N9X3 169 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 OR4K15Q8NH41 348 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 SETD6Q8TBK2 473 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 DIRAS2Q96HU8 199 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 CMTM3Q96MX0 182 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 HDHD3Q9BSH5 251 aaPredicted RBP14.21□□□□□ -0.13
LIME1-202ENST00000444951 KCNS2Q9ULS6 477 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 HSF4Q9ULV5 492 aa14.21□□□□□ -0.13
LIME1-202ENST00000444951 TMEM30CPA0ZSE6 113 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 FUOMA2VDF0 154 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 TMEM235A6NFC5 223 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 B4DSR2 109 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 GPR37O15354 613 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 XRCC3O43542 346 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 TGFAP01135 160 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 GLAP06280 429 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 MSMBP08118 114 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 CD3GP09693 182 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 SRD5A1P18405 259 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 TALDO1P37837 337 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 KCNJ3P48549 501 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 TAS2R20P59543 309 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 MRPS15P82914 257 aaKnown RBP14.2□□□□□ -0.14
LIME1-202ENST00000444951 RSBN1Q5VWQ0 802 aaPredicted RBP14.2□□□□□ -0.14
LIME1-202ENST00000444951 CMSS1Q9BQ75 279 aaKnown RBP14.2□□□□□ -0.14
LIME1-202ENST00000444951 NUDT16L1Q9BRJ7 211 aaKnown RBP14.2□□□□□ -0.14
LIME1-202ENST00000444951 MMP26Q9NRE1 261 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 RPUSD1Q9UJJ7 312 aaKnown RBP14.2□□□□□ -0.14
LIME1-202ENST00000444951 KCNK7Q9Y2U2 307 aa14.2□□□□□ -0.14
LIME1-202ENST00000444951 A0A0A6YYH2 397 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 PPIAL4CA0A0B4J2A2 164 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 ODAMA1E959 279 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 A6NJ64 397 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 A8MXK9 166 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 MFNGO00587 321 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 CLPXO76031 633 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 ECDO95905 644 aaPredicted RBP14.19□□□□□ -0.14
LIME1-202ENST00000444951 CSN2P05814 226 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 PPIAL4GP0DN37 164 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 TNFSF8P32971 234 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 MNDAP41218 407 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 GLP1RP43220 463 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 ZNF260Q3ZCT1 412 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 TMEM200BQ69YZ2 307 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 ZNF497Q6ZNH5 498 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 SNX29P2Q8IUI4 249 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 GCDHQ92947 438 aaPredicted RBP14.19□□□□□ -0.14
LIME1-202ENST00000444951 ONECUT1Q9UBC0 465 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 TRAPPC2LQ9UL33 140 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 A3GALT2U3KPV4 340 aa14.19□□□□□ -0.14
LIME1-202ENST00000444951 TRBV23-1A0A0A0MS06 115 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 IGHV2-70DA0A0C4DH43 119 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 hADV38S2A0JD32 116 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 ENSAO43768 121 aaKnown RBP14.18□□□□□ -0.14
LIME1-202ENST00000444951 MT-ND4P03905 459 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 ERP29P30040 261 aaKnown RBP14.18□□□□□ -0.14
LIME1-202ENST00000444951 GNG2P59768 71 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 ZNF273Q14593 569 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 RNASE12Q5GAN4 147 aaKnown RBP14.18□□□□□ -0.14
LIME1-202ENST00000444951 SLC35E4Q6ICL7 350 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 MRGPRDQ8TDS7 321 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 NUDCD2Q8WVJ2 157 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 C1orf159Q96HA4 380 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 C19orf24Q9BVV8 132 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 AUNIPQ9H7T9 357 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 HIF1ANQ9NWT6 349 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 PTTG2Q9NZH5 202 aa14.18□□□□□ -0.14
LIME1-202ENST00000444951 NBEAL1Q6ZS30 2694 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 TRGV10A0A0A0MS01 117 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 LIPFP07098 398 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 GSTP1P09211 210 aaKnown RBP14.17□□□□□ -0.14
LIME1-202ENST00000444951 CCL3L1P16619 93 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 ARF6P62330 175 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 ARL6IP1Q15041 203 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 CR1LQ2VPA4 569 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 HACD4Q5VWC8 232 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 GLCCI1Q86VQ1 547 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 OR6Q1Q8NGQ2 317 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 OR13A1Q8NGR1 328 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms